RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 HDAC10Q969S8 669 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 NT5C3BQ969T7 300 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 HSPBAP1Q96EW2 488 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 RMND5BQ96G75 393 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 SPAG4Q9NPE6 437 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 UBA6A0AVT1 1052 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 TSPAN3O60637 253 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 GJA5P36382 358 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 STT3AP46977 705 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 KCNC1P48547 511 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 ZNF792Q3KQV3 632 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 TTC33Q6PID6 262 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 RDH11Q8TC12 318 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 BLOC1S5Q8TDH9 187 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 GPR152Q8TDT2 470 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 ESAMQ96AP7 390 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 EFHD1Q9BUP0 239 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 SENP6Q9GZR1 1112 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 CNOT6Q9ULM6 557 aaKnown RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 TCAF1Q9Y4C2 921 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 RRN3P2A6NIE6 340 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 NRP2O60462 931 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 IPO13O94829 963 aaKnown RBP14.47□□□□□ -0.09
CPSF7-201ENST00000340437 LINC00032P0C843 101 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 NCK1P16333 377 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 WARSP23381 471 aaKnown RBP14.47□□□□□ -0.09
CPSF7-201ENST00000340437 SCNN1AP37088 669 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 GRIK1P39086 918 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 PFKFB4Q16877 469 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 DUSP28Q4G0W2 176 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 AHI1Q8N157 1196 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 CBR4Q8N4T8 237 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 DLG3Q92796 817 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 PBXIP1Q96AQ6 731 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 TUBGCP3Q96CW5 907 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 C3orf30Q96M34 536 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 GPR78Q96P69 363 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 SEPHS2Q99611 448 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 MID1IP1Q9NPA3 183 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 NSMCE4AQ9NXX6 385 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 DMTF1Q9Y222 760 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 CCL15-CCL14A0A0B4J2E2 113 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 SOCS2O14508 198 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 GJB3O75712 270 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 MTHFD1P11586 935 aaKnown RBP14.47□□□□□ -0.09
CPSF7-201ENST00000340437 GFAPP14136 432 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 ZNF26P17031 533 aaPredicted RBP14.47□□□□□ -0.09
CPSF7-201ENST00000340437 CCR1P32246 355 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 ADARP55265 1226 aaKnown RBP14.47□□□□□ -0.09
CPSF7-201ENST00000340437 MFSD10Q14728 455 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 CCL15Q16663 113 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 UBXN11Q5T124 520 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 CPNE9Q8IYJ1 553 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 ASB9Q96DX5 294 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 DTNBP1Q96EV8 351 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 EML4Q9HC35 981 aaKnown RBP14.47□□□□□ -0.09
CPSF7-201ENST00000340437 GTF2IRD1Q9UHL9 959 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 MYRFQ9Y2G1 1151 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 ZNF711Q9Y462 761 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 YAP1P46937 504 aaKnown RBP14.47□□□□□ -0.09
CPSF7-201ENST00000340437 NDST2P52849 883 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 TOP6BLQ8N6T0 577 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 ISL2Q96A47 359 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 B3GALT6Q96L58 329 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 UNC93B1Q9H1C4 597 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 CNGB3Q9NQW8 809 aa14.47□□□□□ -0.09
CPSF7-201ENST00000340437 BAIAP3O94812 1187 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 F9P00740 461 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 CBLBQ13191 982 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 C14orf80Q86SX3 495 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 CPSF7Q8N684 471 aaKnown RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 DRAXINQ8NBI3 349 aaPredicted RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 TRPC4APQ8TEL6 797 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 NSUN5Q96P11 429 aaKnown RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 TINF2Q9BSI4 451 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 HAUS8Q9BT25 410 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 ADARB2Q9NS39 739 aaKnown RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 IPO11Q9UI26 975 aaKnown RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 TIMM22Q9Y584 194 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 INPP4BO15327 924 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 THP07101 528 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 LTA4HP09960 611 aaKnown RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 GEMP55040 296 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 YBX1P67809 324 aaKnown RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 DSC2Q02487 901 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 PLCL1Q15111 1095 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 HECTD2Q5U5R9 776 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 HMGCLL1Q8TB92 370 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 DDI1Q8WTU0 396 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 VAT1Q99536 393 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 HSFX1Q9UBD0 423 aa14.46□□□□□ -0.09
CPSF7-201ENST00000340437 RSL24D1Q9UHA3 163 aaKnown RBP14.46□□□□□ -0.09
CPSF7-201ENST00000340437 F8W810 466 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 H3BMM5 538 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 TMX2-CTNND1H3BSU7 103 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 ANGPT2O15123 496 aa14.46□□□□□ -0.1
CPSF7-201ENST00000340437 HNRNPCP07910 306 aaKnown RBP eCLIP14.46□□□□□ -0.1
CPSF7-201ENST00000340437 HSPA8P11142 646 aaKnown RBP14.46□□□□□ -0.1
CPSF7-201ENST00000340437 EEF1B2P24534 225 aaKnown RBP14.46□□□□□ -0.1
CPSF7-201ENST00000340437 HADHAP40939 763 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms