RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 GJB3O75712 270 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 APOA4P06727 396 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 RHDQ02161 417 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 APOFQ13790 326 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 OGFOD2Q6N063 350 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 RETREG3Q86VR2 466 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 DLG3Q92796 817 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 KCNN1Q92952 543 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 C12orf43Q96C57 262 aaKnown RBP16.22■□□□□ 0.19
SCARB1-202ENST00000339570 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 TRAF6Q9Y4K3 522 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 TIMM22Q9Y584 194 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 ARNTP27540 789 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 FOXA1P55317 472 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 FAM187BQ17R55 369 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 KCTD11Q693B1 232 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 DPP9Q86TI2 863 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 SHCBP1Q8NEM2 672 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 OR6J1Q8NGC5 347 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 GIPC3Q8TF64 312 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 TUBGCP3Q96CW5 907 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 SMOQ99835 787 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 EFHD1Q9BUP0 239 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 MUC3BQ9H195 1237 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 UNC93B1Q9H1C4 597 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 POLR1BQ9H9Y6 1135 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 ERI2A8K979 691 aaKnown RBP16.22■□□□□ 0.19
SCARB1-202ENST00000339570 UBFD1O14562 309 aaKnown RBP16.22■□□□□ 0.19
SCARB1-202ENST00000339570 AP1G1O43747 822 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 H2AFYO75367 372 aaKnown RBP16.22■□□□□ 0.19
SCARB1-202ENST00000339570 CTSHP09668 335 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 ATP5F1P24539 256 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-202ENST00000339570 BNIP3Q12983 259 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 GRB7Q14451 532 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 RABL3Q5HYI8 236 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 ACBD5Q5T8D3 534 aaPredicted RBP16.22■□□□□ 0.19
SCARB1-202ENST00000339570 SDHAF4Q5VUM1 108 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 TAC4Q86UU9 113 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 CRYBG2Q8N1P7 616 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 B3GALT6Q96L58 329 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 NT5MQ9NPB1 228 aa16.22■□□□□ 0.19
SCARB1-202ENST00000339570 H3BNH8 94 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 CRCPO75575 148 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 PRSS56P0CW18 603 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 EMP3P54852 163 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 CTBSQ01459 385 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 PFKFB4Q16877 469 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 PCID2Q5JVF3 399 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 TMEM74Q96NL1 305 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 GPR78Q96P69 363 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 C1orf50Q9BV19 199 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 MID1IP1Q9NPA3 183 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 A0A0J9YYE9 177 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 HSPA13P48723 471 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 CYP51A1Q16850 503 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 LRRC52Q8N7C0 313 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.19
SCARB1-202ENST00000339570 ZNF560Q96MR9 790 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 OSBPL11Q9BXB4 747 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 CLK4Q9HAZ1 481 aaKnown RBP16.21■□□□□ 0.19
SCARB1-202ENST00000339570 PRDM16Q9HAZ2 1276 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 FBXW11Q9UKB1 542 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 SIP14410 1827 aa16.21■□□□□ 0.19
SCARB1-202ENST00000339570 EI24O14681 340 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 MAN1A2O60476 641 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 PENKP01210 267 aaPredicted RBP16.21■□□□□ 0.18
SCARB1-202ENST00000339570 HLA-DQB2P05538 268 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 ZNF23P17027 643 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 CD247P20963 164 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 DAOAP59103 153 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 LRP8Q14114 963 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 DCAF4L1Q3SXM0 396 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 FGD3Q5JSP0 725 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 TRPC4APQ8TEL6 797 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 SEMA4BQ9NPR2 832 aaPredicted RBP16.21■□□□□ 0.18
SCARB1-202ENST00000339570 PNPLA3Q9NST1 481 aa16.21■□□□□ 0.18
SCARB1-202ENST00000339570 ANGPT2O15123 496 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 IPO13O94829 963 aaKnown RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 KCNH1O95259 989 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 ATE1O95260 518 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 HMGB2P26583 209 aaKnown RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 SH3BGRP55822 239 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 C6orf10Q5SRN2 563 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 CPSF7Q8N684 471 aaKnown RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 PDZD8Q8NEN9 1154 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 SENP8Q96LD8 212 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 MRPL57Q9BQC6 102 aaKnown RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 LTB4R2Q9NPC1 389 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 UBA6A0AVT1 1052 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 CLOCKO15516 846 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 TOMM70O94826 608 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 ALDOCP09972 364 aaKnown RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 PIWIL4Q7Z3Z4 852 aaKnown RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 ISOC1Q96CN7 298 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 SLC39A8Q9C0K1 460 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 ZNF385DQ9H6B1 395 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 AKTIPQ9H8T0 292 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 ANKRD6Q9Y2G4 727 aa16.2■□□□□ 0.18
SCARB1-202ENST00000339570 MAGED1Q9Y5V3 778 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-202ENST00000339570 NME4O00746 187 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms