RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PPRC1Q5VV67 1664 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 A0A1B0GTQ1 180 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CCDC154A6NI56 674 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 C9IYK1 514 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SGCEO43556 437 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 AVILO75366 819 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 DGAT1O75907 488 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TSPAN12O95859 305 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SERPINE1P05121 402 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RAC2P15153 192 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 XRCC1P18887 633 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ATP2B4P23634 1241 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ETV4P43268 484 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PMS1P54277 932 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RGS1Q08116 209 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF267Q14586 743 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SKIV2LQ15477 1246 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 DUSP6Q16828 381 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 BHLHB9Q6PI77 547 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 C11orf88Q6PI97 169 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MICU3Q86XE3 530 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RNF113BQ8IZP6 322 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 MFSD4AQ8N468 514 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 OR8H1Q8NGG4 311 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 OR52N1Q8NH53 320 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 WDR48Q8TAF3 677 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ZCCHC2Q9C0B9 1178 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 FAM83DQ9H4H8 585 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 KAT8Q9H7Z6 458 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 C19orf12Q9NSK7 152 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SMPD3Q9NY59 655 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF69Q9UC07 566 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PLLPQ9Y342 182 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ST14Q9Y5Y6 855 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SHPRHQ149N8 1683 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 NFASCO94856 1347 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 UNC13BO14795 1591 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 DIP2AQ14689 1571 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 USP6P35125 1406 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 NT5C1B-RDH14C9J2C7 533 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TBC1D4O60343 1298 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 HPRP00739 348 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PROCP04070 461 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PLA2G4BP0C869 781 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF182P17025 639 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 FASP25445 335 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 HTR3AP46098 478 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PSMD8P48556 350 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 VEGFCP49767 419 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SCN1BQ07699 218 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SPIRE1Q08AE8 756 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RIN1Q13671 783 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 KCNJ11Q14654 390 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 TIMM50Q3ZCQ8 353 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RNF212Q495C1 297 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CDNFQ49AH0 187 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 FBXO48Q5FWF7 155 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 XRRA1Q6P2D8 792 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 G2E3Q7L622 706 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 P2RY8Q86VZ1 359 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PPIL6Q8IXY8 311 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 ATPAF2Q8N5M1 289 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CNTD1Q8N815 330 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SLC7A14Q8TBB6 771 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 DCAKDQ8WVC6 231 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SMG7Q92540 1137 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 COPS5Q92905 334 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CCDC120Q96HB5 630 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CPXM1Q96SM3 734 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 LDAHQ9H6V9 325 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 SCN3BQ9NY72 215 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 UBQLN2Q9UHD9 624 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CYB5R1Q9UHQ9 305 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 KCNH4Q9UQ05 1017 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RUVBL1Q9Y265 456 aaKnown RBP4.18□□□□□ -1.74
NEDD4-201ENST00000338963 PCDHGA8Q9Y5G5 932 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 RNF215Q9Y6U7 377 aa4.18□□□□□ -1.74
NEDD4-201ENST00000338963 CPS1P31327 1500 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NEXMIFQ5QGS0 1516 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 LILRB5O75023 590 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PIGNO95427 931 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CRYABP02511 175 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 C1QBP02746 253 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 IL1R2P27930 398 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CDH5P33151 784 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GJC1P36383 396 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ARCN1P48444 511 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 EIF3EP60228 445 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GPC5P78333 572 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ERV3-1Q14264 604 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 VPS72Q15906 364 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MGAT5BQ3V5L5 792 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SUPT20HL1Q3ZLR7 823 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 XKR9Q5GH70 373 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FGD3Q5JSP0 725 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SAMD4BQ5PRF9 694 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CNSTQ6PJW8 725 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ERMP1Q7Z2K6 904 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms