RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ATAD3BQ5T9A4 648 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 PMF1Q6P1K2 205 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 CHMP1BQ7LBR1 199 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 HDDC2Q7Z4H3 204 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 ANKS1BQ7Z6G8 1248 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 DSELQ8IZU8 1212 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 TOP6BLQ8N6T0 577 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 KLHL5Q96PQ7 755 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 PLEKHG4BQ96PX9 1271 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 TSEN34Q9BSV6 310 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 PLGRKTQ9HBL7 147 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 ZDHHC18Q9NUE0 388 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 COL20A1Q9P218 1284 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 ADCY6O43306 1168 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 MFSD11O43934 449 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 TSC22D2O75157 780 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 PCDH8O95206 1070 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 OTCP00480 354 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 COL6A2P12110 1019 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 RPL9P32969 192 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 PSEN1P49768 467 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 SEMA5AQ13591 1074 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 CPSF6Q16630 551 aaKnown RBP eCLIP13.82□□□□□ -0.21e-10■□□□□ 11.3
RTN4-202ENST00000337526 USP39Q53GS9 565 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 HECTD3Q5T447 861 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 DRICH1Q6PGQ1 229 aaPredicted RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 CYP4X1Q8N118 509 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 OR4L1Q8NH43 312 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 LENG8Q96PV6 779 aaPredicted RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 MRPL9Q9BYD2 267 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 NOL11Q9H8H0 719 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 ACSS2Q9NR19 701 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 CRATP43155 626 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 USP45Q70EL2 814 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 VN1R5Q7Z5H4 357 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 ZNF384Q8TF68 577 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 MFSD3Q96ES6 412 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 CADM1Q9BY67 442 aaKnown RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 HDHD2Q9H0R4 259 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 TAS2R1Q9NYW7 299 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 PRKAG3Q9UGI9 489 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 RPS6KA6Q9UK32 745 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 AJAP1Q9UKB5 411 aaPredicted RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 STXBP5LQ9Y2K9 1186 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 TDRKHQ9Y2W6 561 aaKnown RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 PLIN3O60664 434 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 TIPRLO75663 272 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 FGF1P05230 155 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 HPGDP15428 266 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 BLMHQ13867 455 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 MTX3Q5HYI7 312 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 BRMS1LQ5PSV4 323 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 ZNF549Q6P9A3 640 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 GK5Q6ZS86 529 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 TPGS1Q6ZTW0 290 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 SLC26A9Q7LBE3 791 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 SAPCD2Q86UD0 394 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 GPR180Q86V85 440 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 ZNF483Q8TF39 744 aaPredicted RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 SOCS4Q8WXH5 440 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 GPR20Q99678 358 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 CIB1Q99828 191 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 NDEL1Q9GZM8 345 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 SDCBP2Q9H190 292 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 A0A0J9YYE9 177 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 MDM4O15151 490 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 CYP7B1O75881 506 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 LYNP07948 512 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 UNGP13051 313 aaPredicted RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 NOS3P29474 1203 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 GRK4P32298 578 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 PLD1Q13393 1074 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 ACOX1Q15067 660 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 DLG2Q15700 870 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 ALFQ53S48 1182 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 BBS4Q96RK4 519 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 HOPXQ9BPY8 73 aaPredicted RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 GOLGA2P5Q9HBQ8 144 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
RTN4-202ENST00000337526 DNMT3LQ9UJW3 386 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 TMCO1Q9UM00 188 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 GTF2A1LQ9UNN4 478 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 ST3GAL5Q9UNP4 418 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 SLC12A4Q9UP95 1085 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 BTBD3Q9Y2F9 522 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
RTN4-202ENST00000337526 SMIM28A0A1B0GU29 152 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 CENPXA8MT69 81 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 SLC22A3O75751 556 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 IPO13O94829 963 aaKnown RBP13.8□□□□□ -0.2
RTN4-202ENST00000337526 CCNA2P20248 432 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 FOXN2P32314 431 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 ARL2P36404 184 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 PERM1Q5SV97 790 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 SDHAF4Q5VUM1 108 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 TXNDC11Q6PKC3 985 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 CPNE8Q86YQ8 564 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 OFCC1Q8IZS5 231 aa13.8□□□□□ -0.2
RTN4-202ENST00000337526 ZNF540Q8NDQ6 660 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms