RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 C12orf43Q96C57 262 aaKnown RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 SGF29Q96ES7 293 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 VPS39Q96JC1 886 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 FCRL2Q96LA5 508 aaPredicted RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 CPNE1Q99829 537 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 TPK1Q9H3S4 243 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 SIAEQ9HAT2 523 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 CASS4Q9NQ75 786 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 PSMD13Q9UNM6 376 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 STX16-NPEPL1H3BU86 382 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 CCL22O00626 93 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 ATE1O95260 518 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 UGT1A6P19224 532 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 UGT1A1P22309 533 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 UGT1A4P22310 534 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 CNTFP26441 200 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 CCND3P30281 292 aaPredicted RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 UGT1A3P35503 534 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 UGT1A5P35504 534 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 MAXP61244 160 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 CBLBQ13191 982 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 SEPT6Q14141 434 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 ZNF423Q2M1K9 1284 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 SLC39A12Q504Y0 691 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 METTL23Q86XA0 190 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 DDHD1Q8NEL9 900 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 URGCPQ8TCY9 931 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 HDAC11Q96DB2 347 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 FICDQ9BVA6 458 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 C1orf21Q9H246 121 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 NOX1Q9Y5S8 564 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 UNCXA6NJT0 531 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 SERPINE1P05121 402 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 XRCC1P18887 633 aaPredicted RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 AOC1P19801 751 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 NR4A1P22736 598 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 GRK4P32298 578 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 SPRP35270 261 aaPredicted RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 ARPP19P56211 112 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 BTBD8Q5XKL5 378 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 ESRP1Q6NXG1 681 aaKnown RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 TTC9BQ8N6N2 239 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 GABPB2Q8TAK5 448 aaPredicted RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 JADE3Q92613 823 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 OMDQ99983 421 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 OSER1Q9NX31 292 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 EPS15L1Q9UBC2 864 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 CROTQ9UKG9 612 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 APOBEC2Q9Y235 224 aaKnown RBP13.99□□□□□ -0.17
SF1-202ENST00000334944 CORINQ9Y5Q5 1042 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 PTCH2Q9Y6C5 1203 aa13.99□□□□□ -0.17
SF1-202ENST00000334944 C7orf72A4D263 438 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 C9IYK1 514 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 GPR182O15218 404 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 SEC24DO94855 1032 aaPredicted RBP13.98□□□□□ -0.17
SF1-202ENST00000334944 TBX18O95935 607 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 MX2P20592 715 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 IDH3AP50213 366 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 LIMK2P53671 638 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 GJA9P57773 515 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 GNA12Q03113 381 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 ITGADQ13349 1161 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 TUBB3Q13509 450 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 ZNF354CQ86Y25 554 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 SLC41A1Q8IVJ1 513 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 ATPAF2Q8N5M1 289 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 MAPK15Q8TD08 544 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 NAA50Q9GZZ1 169 aaKnown RBP13.98□□□□□ -0.17
SF1-202ENST00000334944 TASP1Q9H6P5 420 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 RAB26Q9ULW5 256 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 SPO11Q9Y5K1 396 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 EIF3FO00303 357 aaPredicted RBP13.98□□□□□ -0.17
SF1-202ENST00000334944 AURKAO14965 403 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 HSPA4LO95757 839 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 HMBSP08397 361 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 GABRB3P28472 473 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 ABCE1P61221 599 aaKnown RBP13.98□□□□□ -0.17
SF1-202ENST00000334944 TSPY1Q01534 308 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 FGD3Q5JSP0 725 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 LDLRAP1Q5SW96 308 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 GRTP1Q5TC63 336 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 CYS1Q717R9 158 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 SNX29P2Q8IUI4 249 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 KCTD4Q8WVF5 259 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 ISOC1Q96CN7 298 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 SCYL1Q96KG9 808 aa13.98□□□□□ -0.17
SF1-202ENST00000334944 WDR55Q9H6Y2 383 aaPredicted RBP13.98□□□□□ -0.17
SF1-202ENST00000334944 A0A1W2PQH9 124 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 DYTNA2CJ06 578 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 F9P00740 461 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 IL1BP01584 269 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 ZNF23P17027 643 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 TCEA1P23193 301 aaKnown RBP13.97□□□□□ -0.17
SF1-202ENST00000334944 THOP1P52888 689 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 ADGRE1Q14246 886 aa13.97□□□□□ -0.17
SF1-202ENST00000334944 FLOT2Q14254 428 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms