RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 DHRSXQ8N5I4 330 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 MAGEE2Q8TD90 523 aaPredicted RBP13.82□□□□□ -0.2
SYNE3-201ENST00000334258 C1QTNF1Q9BXJ1 281 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 DPEP3Q9H4B8 488 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 ZFYVE28Q9HCC9 887 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 SETD4Q9NVD3 440 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 TLL2Q9Y6L7 1015 aa13.82□□□□□ -0.2
SYNE3-201ENST00000334258 MAGEB16A2A368 324 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 FAM155AB1AL88 458 aaPredicted RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 M0QYT0 321 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 NR5A2O00482 541 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 BCL10O95999 233 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CCNA2P20248 432 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 YWHAQP27348 245 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 RAB15P59190 212 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 C1QTNF8P60827 252 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 RAB10P61026 200 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 LDLRAP1Q5SW96 308 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 PDZD4Q76G19 769 aaPredicted RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 ZC3H7AQ8IWR0 971 aaKnown RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 SPATA17Q96L03 361 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 TRIM15Q9C019 465 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CDH7Q9ULB5 785 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 FZD10Q9ULW2 581 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 TMED5Q9Y3A6 229 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 V9GYQ6 96 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 PTPRFP10586 1907 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 FAM95CA0A1B0GW59 222 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 ADAM23O75077 832 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 NFKB1P19838 968 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 MYF6P23409 242 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 POU6F1Q14863 301 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 MOGQ16653 247 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CEP97Q8IW35 865 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 SLC15A4Q8N697 577 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 ZNF420Q8TAQ5 688 aaPredicted RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CENPIQ92674 756 aaPredicted RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 C9orf16Q9BUW7 83 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 VRTNQ9H8Y1 702 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 FBRSL1Q9HCM7 1045 aaKnown RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 USP3Q9Y6I4 520 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 ARID2Q68CP9 1835 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 A0A087WZ62 844 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CCL15-CCL14A0A0B4J2E2 113 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 EI24O14681 340 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 GAS2O43903 313 aaKnown RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 MT-ND1P03886 318 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 IDO1P14902 403 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CCL15Q16663 113 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CYP2A13Q16696 494 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 FAM219BQ5XKK7 198 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 PDZD8Q8NEN9 1154 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 BPIFB6Q8NFQ5 453 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 SPATA33Q96N06 139 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 ZMAT2Q96NC0 199 aaKnown RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 PPP1R10Q96QC0 940 aaKnown RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 FDXACB1Q9BRP7 624 aaPredicted RBP13.81□□□□□ -0.2
SYNE3-201ENST00000334258 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 MUC3BQ9H195 1237 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 NMRK2Q9NPI5 230 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CASS4Q9NQ75 786 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 CD300AQ9UGN4 299 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 AKT3Q9Y243 479 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 PPP2R3BQ9Y5P8 575 aa13.81□□□□□ -0.2
SYNE3-201ENST00000334258 UNCXA6NJT0 531 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 PDHXO00330 501 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 INPP4BO15327 924 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 KCNH1O95259 989 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 JCHAINP01591 159 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 TXNP10599 105 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 ERCC2P18074 760 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 NPY2RP49146 381 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 TUFMP49411 452 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 OAZ1P54368 228 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 BFSP2Q13515 415 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 SPIDRQ14159 915 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 NOL9Q5SY16 702 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 CLEC6AQ6EIG7 209 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 ANKRD26P1Q6NSI1 321 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 METTL7BQ6UX53 244 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 KDELC2Q7Z4H8 507 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 CEP295NLQ96MC4 621 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 UHRF1Q96T88 793 aaPredicted RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 EML4Q9HC35 981 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 WARS2Q9UGM6 360 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 PGK1P00558 417 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 ATP5F1P24539 256 aaPredicted RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 GABRB3P28472 473 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 MATKP42679 507 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 BST2Q10589 180 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 CAPRIN1Q14444 709 aaKnown RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 CYP51A1Q16850 503 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 UGP2Q16851 508 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 PKDCCQ504Y2 493 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 STRADAQ7RTN6 431 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 CUZD1Q86UP6 607 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms