RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PPARGP37231 505 aaPredicted RBP19.04■□□□□ 0.64
RFTN1-201ENST00000334133 DPP6P42658 865 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 CDH13P55290 713 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 POU4F1Q01851 419 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 DSG1Q02413 1049 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 ZRSR2Q15696 482 aaKnown RBP19.04■□□□□ 0.64
RFTN1-201ENST00000334133 FAM83EQ2M2I3 478 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 METTL21CQ5VZV1 264 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 NADSYN1Q6IA69 706 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 PRSS55Q6UWB4 352 aaPredicted RBP19.04■□□□□ 0.64
RFTN1-201ENST00000334133 DHDDSQ86SQ9 333 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 RNF180Q86T96 592 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 CILP2Q8IUL8 1156 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 ATP6V0D2Q8N8Y2 350 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 TTC16Q8NEE8 873 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 DNAJC1Q96KC8 554 aaKnown RBP19.04■□□□□ 0.64
RFTN1-201ENST00000334133 CYP2S1Q96SQ9 504 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 EBF3Q9H4W6 596 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 TET1Q8NFU7 2136 aa19.04■□□□□ 0.64
RFTN1-201ENST00000334133 COL4A4P53420 1690 aaPredicted RBP19.04■□□□□ 0.64
RFTN1-201ENST00000334133 PATJQ8NI35 1801 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 A0A0U1RQS6 177 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 COL6A2P12110 1019 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 RPL17P18621 184 aaKnown RBP19.03■□□□□ 0.64
RFTN1-201ENST00000334133 MTTPP55157 894 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 MSLNQ13421 630 aaPredicted RBP19.03■□□□□ 0.64
RFTN1-201ENST00000334133 TRIP10Q15642 601 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 SFT2D3Q587I9 215 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 TECRLQ5HYJ1 363 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 PHC3Q8NDX5 983 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 BTN2A3PQ96KV6 586 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 C8orf48Q96LL4 319 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 SPON2Q9BUD6 331 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 PRKD2Q9BZL6 878 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 SLC24A3Q9HC58 644 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 CLIC5Q9NZA1 410 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 ANKRD12Q6UB98 2062 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 FKBP6O75344 327 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 SLC2A3P11169 496 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 XRCC1P18887 633 aaPredicted RBP19.03■□□□□ 0.64
RFTN1-201ENST00000334133 ATP5F1P24539 256 aaPredicted RBP19.03■□□□□ 0.64
RFTN1-201ENST00000334133 NDST2P52849 883 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 C1QTNF8P60827 252 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 SULT2A1Q06520 285 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 RTP2Q5QGT7 225 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 KYQ8NBH2 561 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 OR7D4Q8NG98 312 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 PTCD2Q8WV60 388 aaKnown RBP19.03■□□□□ 0.64
RFTN1-201ENST00000334133 CORO1CQ9ULV4 474 aaPredicted RBP19.03■□□□□ 0.64
RFTN1-201ENST00000334133 VWA7Q9Y334 891 aa19.03■□□□□ 0.64
RFTN1-201ENST00000334133 LRRC14BA6NHZ5 514 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 SDHDO14521 159 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 AOC2O75106 756 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 TRPA1O75762 1119 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 EOMESO95936 686 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 HTR7P34969 479 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 BTKQ06187 659 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 FAM26DQ5JW98 314 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 RNF220Q5VTB9 566 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 MSANTD2Q6P1R3 559 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 LGI2Q8N0V4 545 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.02■□□□□ 0.64
RFTN1-201ENST00000334133 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.02■□□□□ 0.64
RFTN1-201ENST00000334133 PDE4DIPQ5VU43 2346 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 PPP6CO00743 305 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 TLR5O60602 858 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 ATXN1LP0C7T5 689 aaKnown RBP19.02■□□□□ 0.64
RFTN1-201ENST00000334133 SEMA3AQ14563 771 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 LBRQ14739 615 aaKnown RBP19.02■□□□□ 0.64
RFTN1-201ENST00000334133 PTPRRQ15256 657 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 PCDH20Q8N6Y1 951 aaKnown RBP19.02■□□□□ 0.64
RFTN1-201ENST00000334133 DBF4BQ8NFT6 615 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 GDPD5Q8WTR4 605 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 IFT43Q96FT9 208 aa19.02■□□□□ 0.64
RFTN1-201ENST00000334133 MRM3Q9HC36 420 aaKnown RBP19.02■□□□□ 0.64
RFTN1-201ENST00000334133 A0A087X1B8 175 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 MTMR11A4FU01 709 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 WASH4PA8MWX3 477 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 LDB2O43679 373 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 VNN2O95498 520 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 LTA4HP09960 611 aaKnown RBP19.02■□□□□ 0.63
RFTN1-201ENST00000334133 MRPS22P82650 360 aaKnown RBP19.02■□□□□ 0.63
RFTN1-201ENST00000334133 MRPS35P82673 323 aaKnown RBP19.02■□□□□ 0.63
RFTN1-201ENST00000334133 MAP3K21Q5TCX8 1036 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 IRGCQ6NXR0 463 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 FUBP3Q96I24 572 aaKnown RBP eCLIP19.02■□□□□ 0.63
RFTN1-201ENST00000334133 ATP13A1Q9HD20 1204 aa19.02■□□□□ 0.63
RFTN1-201ENST00000334133 EME2A4GXA9 379 aaPredicted RBP19.01■□□□□ 0.63
RFTN1-201ENST00000334133 SUPT7LO94864 414 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 S1PR4O95977 384 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 SP100P23497 879 aaPredicted RBP19.01■□□□□ 0.63
RFTN1-201ENST00000334133 LEPRP48357 1165 aaKnown RBP19.01■□□□□ 0.63
RFTN1-201ENST00000334133 AQP4P55087 323 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 MS4A2Q01362 244 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 ZNF235Q14590 738 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 TRIP4Q15650 581 aaPredicted RBP19.01■□□□□ 0.63
RFTN1-201ENST00000334133 ARNT2Q9HBZ2 717 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 TLR8Q9NR97 1041 aaKnown RBP19.01■□□□□ 0.63
RFTN1-201ENST00000334133 ADAM12O43184 909 aa19.01■□□□□ 0.63
RFTN1-201ENST00000334133 IPO13O94829 963 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms