RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MRPL57Q9BQC6 102 aaKnown RBP12.4□□□□□ -0.42
VPS33B-201ENST00000333371 LIN28AQ9H9Z2 209 aaKnown RBP12.4□□□□□ -0.42
VPS33B-201ENST00000333371 ARHGEF38Q9NXL2 777 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 NSMCE4AQ9NXX6 385 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 AAR2Q9Y312 384 aaKnown RBP12.4□□□□□ -0.42
VPS33B-201ENST00000333371 AP4S1Q9Y587 144 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 ZFC3H1O60293 1989 aaKnown RBP12.4□□□□□ -0.42
VPS33B-201ENST00000333371 F8W810 466 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 PSMD12O00232 456 aaPredicted RBP12.4□□□□□ -0.43
VPS33B-201ENST00000333371 UBDO15205 165 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 CACNG3O60359 315 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 DUSP11O75319 330 aaKnown RBP12.4□□□□□ -0.43
VPS33B-201ENST00000333371 ASLP04424 464 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 CKMT2P17540 419 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 ATP5F1P24539 256 aaPredicted RBP12.4□□□□□ -0.43
VPS33B-201ENST00000333371 ADRA1AP35348 466 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 CDH13P55290 713 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 RPL26P61254 145 aaKnown RBP12.4□□□□□ -0.43
VPS33B-201ENST00000333371 LRP8Q14114 963 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 TRIM25Q14258 630 aaKnown RBP12.4□□□□□ -0.43
VPS33B-201ENST00000333371 UGP2Q16851 508 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 CXCL17Q6UXB2 119 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 CYHR1Q6ZMK1 362 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 C14orf80Q86SX3 495 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 AHI1Q8N157 1196 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 C3orf30Q96M34 536 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 FCRL5Q96RD9 977 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.43
VPS33B-201ENST00000333371 NOL11Q9H8H0 719 aaKnown RBP12.4□□□□□ -0.43
VPS33B-201ENST00000333371 SPC25Q9HBM1 224 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 TREX1Q9NSU2 369 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 HSFX1Q9UBD0 423 aa12.4□□□□□ -0.43
VPS33B-201ENST00000333371 TRPC5OSA6NMA1 111 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 NPHS1O60500 1241 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 KPNA6O60684 536 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 TIPRLO75663 272 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 F9P00740 461 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 COL6A2P12110 1019 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 UGT1A6P19224 532 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 IHHQ14623 411 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 RFTN1Q14699 578 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-201ENST00000333371 HMBOX1Q6NT76 420 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 TMEM207Q6UWW9 146 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 PIWIL4Q7Z3Z4 852 aaKnown RBP12.39□□□□□ -0.43
VPS33B-201ENST00000333371 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 ASB9Q96DX5 294 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 SMARCD1Q96GM5 515 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 KLHL5Q96PQ7 755 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 IL12RB2Q99665 862 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 MRPS26Q9BYN8 205 aaKnown RBP12.39□□□□□ -0.43
VPS33B-201ENST00000333371 ALG9Q9H6U8 611 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 ZNF696Q9H7X3 374 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 EPS15L1Q9UBC2 864 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 LRRC14BA6NHZ5 514 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 ZNF839A8K0R7 811 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 SLC22A2O15244 555 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 HNRNPRO43390 633 aaKnown RBP12.39□□□□□ -0.43
VPS33B-201ENST00000333371 GJB3O75712 270 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 CCNCP24863 283 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 SOX11P35716 441 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 PRKAA2P54646 552 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 APOFQ13790 326 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 PTPRCAPQ14761 206 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 MFSD14CQ5VZR4 134 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 B3GNT6Q6ZMB0 384 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 LRRTM3Q86VH5 581 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 DLG3Q92796 817 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 CASP10Q92851 521 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-201ENST00000333371 TSGA13Q96PP4 275 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 SLC2A11Q9BYW1 496 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 EPB41L1Q9H4G0 881 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 KCTD3Q9Y597 815 aa12.39□□□□□ -0.43
VPS33B-201ENST00000333371 ANXA9O76027 345 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 PSMC3P17980 439 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 ADSLP30566 484 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 SLC5A2P31639 672 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 LHX1P48742 406 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CDH15P55291 814 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 WNT3AP56704 352 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CACNB2Q08289 660 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 ITKQ08881 620 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 IKBKEQ14164 716 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 MAP7Q14244 749 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 FBXO48Q5FWF7 155 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 C6orf10Q5SRN2 563 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 TFAP2DQ7Z6R9 452 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CHERPQ8IWX8 916 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 CATSPER1Q8NEC5 780 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 DIS3LQ8TF46 1054 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 RPL10LQ96L21 214 aaKnown RBP12.38□□□□□ -0.43
VPS33B-201ENST00000333371 ST3GAL5Q9UNP4 418 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 MRASO14807 208 aa12.38□□□□□ -0.43
VPS33B-201ENST00000333371 TRIM24O15164 1050 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms