RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 A0A087X1B8 175 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 RNF103-CHMP3A0A140T963 221 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 CLIC3O95833 236 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 PSMD5Q16401 504 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 CAMK1DQ8IU85 385 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 SHCBP1Q8NEM2 672 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 GIPC3Q8TF64 312 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 LRCH3Q96II8 777 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 ZNF560Q96MR9 790 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 ARMC1Q9NVT9 282 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 EGFL7Q9UHF1 273 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 BOLA2-SMG1P6H3BVE0 249 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 DLGAP1O14490 977 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 CPB1P15086 417 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 TAF6P49848 677 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 NAA20P61599 178 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 SCAPQ12770 1279 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 INTS6LQ5JSJ4 861 aaKnown RBP23.75■■□□□ 1.39
TSKU-201ENST00000333090 BTBD8Q5XKL5 378 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 PAQR9Q6ZVX9 377 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 EPHX4Q8IUS5 362 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 PPHLN1Q8NEY8 458 aaKnown RBP23.75■■□□□ 1.39
TSKU-201ENST00000333090 FICDQ9BVA6 458 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 FAM49AQ9H0Q0 323 aaPredicted RBP23.75■■□□□ 1.39
TSKU-201ENST00000333090 TUBA8Q9NY65 449 aaPredicted RBP23.75■■□□□ 1.39
TSKU-201ENST00000333090 WDR90Q96KV7 1748 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 GIPC1O14908 333 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 LRIG2O94898 1065 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 POLD2P49005 469 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 HCAR3P49019 387 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 ARL13BQ3SXY8 428 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 TECRLQ5HYJ1 363 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 ARHGAP36Q6ZRI8 547 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 ARMCX2Q7L311 632 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 SPPL2CQ8IUH8 684 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 THAP11Q96EK4 314 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 TBCCD1Q9NVR7 557 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 GDAP2Q9NXN4 497 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 SH3GLB1Q9Y371 365 aa23.75■■□□□ 1.39
TSKU-201ENST00000333090 DNAJC25-GNG10A0A024R161 153 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 SMIM28A0A1B0GU29 152 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 ATE1O95260 518 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 SLC25A27O95847 323 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 DNAJB2P25686 324 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 AIF1P55008 147 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 SEPT6Q14141 434 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 C8orf82Q6P1X6 216 aaPredicted RBP23.74■■□□□ 1.39
TSKU-201ENST00000333090 RETREG3Q86VR2 466 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 ERO1BQ86YB8 467 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 TNIP2Q8NFZ5 429 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 CYGBQ8WWM9 190 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 ATXN3LQ9H3M9 355 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 HIPK3Q9H422 1215 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 CXorf21Q9HAI6 301 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 FBXO5Q9UKT4 447 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 AAR2Q9Y312 384 aaKnown RBP23.74■■□□□ 1.39
TSKU-201ENST00000333090 TRAF6Q9Y4K3 522 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 DFFAO00273 331 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 CD4P01730 458 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 STX1BP61266 288 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 MERTKQ12866 999 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 GPC2Q8N158 579 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 PAIP1Q9H074 479 aaKnown RBP23.74■■□□□ 1.39
TSKU-201ENST00000333090 CCM2LQ9NUG4 571 aaPredicted RBP23.74■■□□□ 1.39
TSKU-201ENST00000333090 CLEC11AQ9Y240 323 aa23.74■■□□□ 1.39
TSKU-201ENST00000333090 MTF2Q9Y483 593 aaPredicted RBP23.74■■□□□ 1.39
TSKU-201ENST00000333090 DHRS12A0PJE2 317 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 SUPT3HO75486 399 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 MYF6P23409 242 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 POU4F1Q01851 419 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 SOX4Q06945 474 aaPredicted RBP23.73■■□□□ 1.39
TSKU-201ENST00000333090 KIF19Q2TAC6 998 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 ALKAL1Q6UXT8 129 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 ANKRD23Q86SG2 305 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 FUNDC1Q8IVP5 155 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 PNPLA1Q8N8W4 532 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 MFSD2AQ8NA29 543 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 EDEM1Q92611 657 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 COLEC11Q9BWP8 271 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 TKTL2Q9H0I9 626 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 PTBP2Q9UKA9 531 aaKnown RBP23.73■■□□□ 1.39
TSKU-201ENST00000333090 LTBP3Q9NS15 1303 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 H3BRB1 525 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 PFKPQ01813 784 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 GRIK4Q16099 956 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 ZNF789Q5FWF6 425 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 GPR107Q5VW38 600 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 C2CD4AQ8NCU7 369 aaPredicted RBP23.73■■□□□ 1.39
TSKU-201ENST00000333090 KCTD13Q8WZ19 329 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 OLFM1Q99784 485 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 TUT1Q9H6E5 874 aaKnown RBP23.73■■□□□ 1.39
TSKU-201ENST00000333090 WDCPQ9H6R7 721 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 SPON1Q9HCB6 807 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 SBF1O95248 1867 aa23.73■■□□□ 1.39
TSKU-201ENST00000333090 NR5A2O00482 541 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 NME4O00746 187 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 USP17L7P0C7H9 530 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 MAGEA8P43361 318 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 MARCH8Q5T0T0 291 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 AGAP9Q5VTM2 703 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms