RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 PCDHB9Q9Y5E1 797 aa16.5■□□□□ 0.23
C11orf88-201ENST00000332814 RAI2Q9Y5P3 530 aa16.5■□□□□ 0.23
C11orf88-201ENST00000332814 SNX11Q9Y5W9 270 aa16.5■□□□□ 0.23
C11orf88-201ENST00000332814 FAM186AA6NE01 2351 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 A6NNZ2 444 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 HACD1B0YJ81 288 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 TLR4O00206 839 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 SPINT1O43278 529 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 HTRA2O43464 458 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 LZTS3O60299 673 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 PRKCGP05129 697 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 PYGMP11217 842 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 CYP2A6P11509 494 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ITIH2P19823 946 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 MMP12P39900 470 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ADCY2Q08462 1091 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 TRAF2Q12933 501 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ZBTB17Q13105 803 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ZNF211Q13398 564 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 PRKD1Q15139 912 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 HLA-BQ31612 363 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ALG1LQ6GMV1 187 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ZNF662Q6ZS27 426 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 USP45Q70EL2 814 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 PTAR1Q7Z6K3 402 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 IQCHQ86VS3 1027 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ZSWIM9Q86XI8 627 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 CDKL3Q8IVW4 592 aaPredicted RBP16.49■□□□□ 0.23
C11orf88-201ENST00000332814 DENND6BQ8NEG7 585 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 OR2I1PQ8NGU4 316 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 FAM174AQ8TBP5 190 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 ASB12Q8WXK4 309 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 AGAP3Q96P47 875 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 C1QTNF2Q9BXJ5 285 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 CEP41Q9BYV8 373 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 CA5BQ9Y2D0 317 aa16.49■□□□□ 0.23
C11orf88-201ENST00000332814 NUMA1Q14980 2115 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 VPS13AQ96RL7 3174 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 SDK1Q7Z5N4 2213 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 DFNA5O60443 496 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 PGLSO95336 258 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 ELFN1P0C7U0 828 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 THEGLP0DJG4 465 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 C6P13671 934 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 CD86P42081 329 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
C11orf88-201ENST00000332814 LIG3P49916 1009 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 CCT8P50990 548 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 XRCC4Q13426 336 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 ARHGEF7Q14155 803 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 NOMO1Q15155 1222 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 B4GALNT4Q76KP1 1039 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 DPPA4Q7L190 304 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 OXR1Q8N573 874 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 TMEM145Q8NBT3 493 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 TRIM58Q8NG06 486 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 HES6Q96HZ4 224 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 QKIQ96PU8 341 aaKnown RBP eCLIP16.48■□□□□ 0.23
C11orf88-201ENST00000332814 VAT1Q99536 393 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 DNAAF2Q9NVR5 837 aaKnown RBP16.48■□□□□ 0.23
C11orf88-201ENST00000332814 DLL3Q9NYJ7 618 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 KLHL8Q9P2G9 620 aaPredicted RBP16.48■□□□□ 0.23
C11orf88-201ENST00000332814 EP300Q09472 2414 aaPredicted RBP16.48■□□□□ 0.23
C11orf88-201ENST00000332814 MYO15AQ9UKN7 3530 aa16.48■□□□□ 0.23
C11orf88-201ENST00000332814 A0A1W2PR77 199 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 WNT9AO14904 365 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 DDX3YO15523 660 aaKnown RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 ZSCAN12O43309 604 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 ZNF189O75820 626 aaPredicted RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 STK10O94804 968 aaKnown RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 WNT1P04628 370 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 PTPN3P26045 913 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 CTSKP43235 329 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 ARRB1P49407 418 aaPredicted RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 CLDN2P57739 230 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 NXPH1P58417 271 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 EIF3EP60228 445 aaKnown RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 OTUD4Q01804 1114 aaKnown RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 SEMG2Q02383 582 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 GSE1Q14687 1217 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 SUZ12Q15022 739 aaKnown RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 RPS6KA1Q15418 735 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 TEX44Q53QW1 395 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 AADACL2Q6P093 401 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 TTC13Q8NBP0 860 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 LPCAT1Q8NF37 534 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 ARRDC2Q8TBH0 407 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 ACTL9Q8TC94 416 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 HTR3CQ8WXA8 447 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 SPOCK2Q92563 424 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 LENG8Q96PV6 779 aaPredicted RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 TDRD1Q9BXT4 1180 aaKnown RBP16.47■□□□□ 0.23
C11orf88-201ENST00000332814 SLC32A1Q9H598 525 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 TM7SF3Q9NS93 570 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 B4GALT6Q9UBX8 382 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 HS3ST3A1Q9Y663 406 aa16.47■□□□□ 0.23
C11orf88-201ENST00000332814 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms