RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RGS16O15492 202 aaPredicted RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 MAFKO60675 156 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ACSL3O95573 720 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 CCNB1P14635 433 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 OR1E1P30953 314 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 PTGER3P43115 390 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 CBX1P83916 185 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 STARD3Q14849 445 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 KLHL38Q2WGJ6 581 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 HNRNPA1L2Q32P51 320 aaKnown RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 CCDC117Q8IWD4 279 aaPredicted RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 KIAA2013Q8IYS2 634 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ZNF557Q8N988 423 aaPredicted RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 FRS2Q8WU20 508 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 PTPRN2Q92932 1015 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ZNF599Q96NL3 588 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 FAM129BQ96TA1 746 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 SLC39A8Q9C0K1 460 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 MAGEH1Q9H213 219 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ARRDC1-AS1Q9H2J1 176 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 LRRC4CQ9HCJ2 640 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 NCDNQ9UBB6 729 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 RAB23Q9ULC3 237 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 TEX264Q9Y6I9 313 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 SPTBN2O15020 2390 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 MAGEB16A2A368 324 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 DFFAO00273 331 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 RAMP2O60895 175 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 AP2A1O95782 977 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ASLP04424 464 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 RETP07949 1114 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 RHOCP08134 193 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ACVRL1P37023 503 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 RPS14P62263 151 aaKnown RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 IL10RBQ08334 325 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 SLC12A1Q13621 1099 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 BBS9Q3SYG4 887 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 FNBP1LQ5T0N5 605 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 PMS2CLQ68D20 193 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ZNF449Q6P9G9 518 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 LINGO4Q6UY18 593 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 TAOK1Q7L7X3 1001 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 SETD3Q86TU7 594 aaPredicted RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 OR2T3Q8NH03 318 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 SIPA1Q96FS4 1042 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 C9orf72Q96LT7 481 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 FCRL5Q96RD9 977 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 MUC3BQ9H195 1237 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 NOL6Q9H6R4 1146 aaKnown RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 LRRC40Q9H9A6 602 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 PSD3Q9NYI0 1048 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 SEPT10Q9P0V9 454 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 RSPH14Q9UHP6 348 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 LGALS13Q9UHV8 139 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 IPO11Q9UI26 975 aaKnown RBP16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 VPS51Q9UID3 782 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 VPS28Q9UK41 221 aa16.61■□□□□ 0.25
PDLIM1-201ENST00000329399 TCRBV7S3A2A0A539 114 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 SDR42E2A6NKP2 422 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 ZMPSTE24O75844 475 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 NEBLO76041 1014 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 CD160O95971 181 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 SRPRAP08240 638 aaKnown RBP16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 STX2P32856 288 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 PAPOLAP51003 745 aaKnown RBP16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 TPMTP51580 245 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 METAP1P53582 386 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 POLD3Q15054 466 aaPredicted RBP16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 TTMPQ5BVD1 217 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 NAPEPLDQ6IQ20 393 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 C3orf62Q6ZUJ4 267 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 ARMCX6Q7L4S7 300 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 CAND1Q86VP6 1230 aaKnown RBP16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 STK40Q8N2I9 435 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 BBS5Q8N3I7 341 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 NETO2Q8NC67 525 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 FBXO36Q8NEA4 188 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 ARL8AQ96BM9 186 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 CNOT10Q9H9A5 744 aaKnown RBP16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 RXFP3Q9NSD7 469 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 USP36Q9P275 1121 aaKnown RBP16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 ACTL7BQ9Y614 415 aa16.6■□□□□ 0.25
PDLIM1-201ENST00000329399 RALGAPA1Q6GYQ0 2036 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 NUP205Q92621 2012 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 RASA4BC9J798 803 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 GOLGA8MH3BSY2 632 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 KCNK1O00180 336 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 RASA4O43374 803 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 JCHAINP01591 159 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 SHBGP04278 402 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 C7P10643 843 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 NPY2RP49146 381 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 GEMP55040 296 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 OXCT1P55809 520 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 TNFAIP8L3Q5GJ75 292 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 B4GALNT4Q76KP1 1039 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 FAM124AQ86V42 546 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 SLC41A1Q8IVJ1 513 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms