RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GOLGA8KD6RF30 607 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 GOLGA8TH3BQL2 631 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 NDC80O14777 642 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 TTC4O95801 387 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 CES1P23141 567 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 NMBRP28336 390 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 SERPINA4P29622 427 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 TNFRSF4P43489 277 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 CCINQ13939 588 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■■■ 41.9
PRPF3-201ENST00000324862 GDPD4Q6W3E5 623 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 C3orf62Q6ZUJ4 267 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 RPLP0P6Q8NHW5 317 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 PPP1R2P1Q96PQ5 205 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 FOXP3Q9BZS1 431 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 PABPC3Q9H361 631 aaKnown RBP15.37■□□□□ 0.05
PRPF3-201ENST00000324862 VPS37BQ9H9H4 285 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 SLC17A6Q9P2U8 582 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 PRKAG3Q9UGI9 489 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 EDDM13A0A1B0GTR0 161 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 KLF8O95600 359 aaPredicted RBP15.37■□□□□ 0.05
PRPF3-201ENST00000324862 EPOP01588 193 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 HNRNPLP14866 589 aaKnown RBP eCLIP15.37■□□□□ 0.053e-8■■■■■ 30.3
PRPF3-201ENST00000324862 COL9A1P20849 921 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 EPHB1P54762 984 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 FAM193AP78312 1265 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 NUDT18Q6ZVK8 323 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 PALM2Q8IXS6 379 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 MRRFQ96E11 262 aaKnown RBP15.37■□□□□ 0.05
PRPF3-201ENST00000324862 ASB2Q96Q27 587 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 FOXQ1Q9C009 403 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 ARHGEF3Q9NR81 526 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 C2orf42Q9NWW7 574 aa15.37■□□□□ 0.05
PRPF3-201ENST00000324862 KPNA3O00505 521 aaPredicted RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 IL1BP01584 269 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 HLA-DPA1P20036 260 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 TMPRSS15P98073 1019 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 PREPLQ4J6C6 727 aaPredicted RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 DNAJC21Q5F1R6 531 aaKnown RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 TSPAN33Q86UF1 283 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 RELL1Q8IUW5 271 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 MREGQ8N565 214 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 EID2BQ96D98 161 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 ECHDC3Q96DC8 303 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 FRMD8Q9BZ67 464 aaPredicted RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 CPEB1Q9BZB8 566 aaKnown RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 IL22Q9GZX6 179 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 RPS6KL1Q9Y6S9 549 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 ANKRD36A6QL64 1941 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 MYLKQ15746 1914 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 FGF1P05230 155 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 DRD1P21728 446 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 ENPP2Q13822 863 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 ESRP1Q6NXG1 681 aaKnown RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 SIX5Q8N196 739 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 FLCNQ8NFG4 579 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 ZNF669Q96BR6 464 aaPredicted RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 ZIM3Q96PE6 472 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 MKRN2Q9H000 416 aaKnown RBP15.36■□□□□ 0.05
PRPF3-201ENST00000324862 PPM1HQ9ULR3 514 aa15.36■□□□□ 0.05
PRPF3-201ENST00000324862 EIF3HO15372 352 aaKnown RBP eCLIP15.35■□□□□ 0.058e-8■□□□□ 10.8
PRPF3-201ENST00000324862 LDB2O43679 373 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 TARSP26639 723 aaKnown RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 HNF1BP35680 557 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 MAPK8P45983 427 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 RAD51Q06609 339 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 ELAVL3Q14576 367 aaKnown RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 RALGPS1Q5JS13 557 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 KDM1BQ8NB78 822 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 OR13C4Q8NGS5 318 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 PIP4K2CQ8TBX8 421 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 FBF1Q8TES7 1133 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 ADGRE3Q9BY15 652 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 TSPYL1Q9H0U9 437 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 BPIFA1Q9NP55 256 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 SAMD15Q9P1V8 674 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 GGT7Q9UJ14 662 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 FBXL21Q9UKT6 434 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 PLAAQ9Y263 795 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 ITM2BQ9Y287 266 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 FNDC3AQ9Y2H6 1198 aaKnown RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 ARIH1Q9Y4X5 557 aaPredicted RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 WDFY4Q6ZS81 3184 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 A0A1W2PQF6 199 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 TCRBV9S1A1TA0A576 114 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 NPIPB15A6NHN6 443 aaPredicted RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 SOCS5O75159 536 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 PSMD8P48556 350 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 NPY2RP49146 381 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 CRYMQ14894 314 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 SLC14A2Q15849 920 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 CNGA3Q16281 694 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 TRMT10CQ7L0Y3 403 aaKnown RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 PARS2Q7L3T8 475 aaKnown RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 SUGP1Q8IWZ8 645 aaKnown RBP15.35■□□□□ 0.05
PRPF3-201ENST00000324862 PLPP6Q8IY26 295 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 ARRDC3Q96B67 414 aa15.35■□□□□ 0.05
PRPF3-201ENST00000324862 TUBGCP5Q96RT8 1024 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms