RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 GCNT7Q6ZNI0 430 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 RD3Q7Z3Z2 195 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 HJURPQ8NCD3 748 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 UBE2E3Q969T4 207 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 LINGO1Q96FE5 620 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CSPG4P5Q96PW8 444 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 RCOR3Q9P2K3 495 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MCM8Q9UJA3 840 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ANGPT4Q9Y264 503 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 SLIT2O94813 1529 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 TRAFD1O14545 582 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 GUCY1B2O75343 617 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MMP3P08254 477 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MC4RP32245 332 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ARL2P36404 184 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 IRF8Q02556 426 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 SPIDRQ14159 915 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ZIK1Q3SY52 487 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 RBM44Q6ZP01 1051 aaKnown RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CUZD1Q86UP6 607 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 SLC12A4Q9UP95 1085 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MFSD11O43934 449 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 PAGE1O75459 146 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CST1P01037 141 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 FTH1P02794 183 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 MAP2K5Q13163 448 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 TTC23Q5W5X9 447 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CDC73Q6P1J9 531 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 LRP10Q7Z4F1 713 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 SPATA19Q7Z5L4 167 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 ZC3H7AQ8IWR0 971 aaKnown RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CPT1BQ92523 772 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 ITCHQ96J02 903 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 NIFKQ9BYG3 293 aaKnown RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 GMPPBQ9Y5P6 360 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 LMO7Q8WWI1 1683 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 DYTNA2CJ06 578 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CATP04040 527 aaKnown RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 FGF1P05230 155 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 ARF4P18085 180 aaPredicted RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 SPIRE1Q08AE8 756 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CRY2Q49AN0 593 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 SDHAF4Q5VUM1 108 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 FBXL19Q6PCT2 694 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 POTEHQ6S545 545 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CMC1Q7Z7K0 106 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CLYBLQ8N0X4 340 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CDYL2Q8N8U2 506 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 OR52K2Q8NGK3 314 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 ENKURQ8TC29 256 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 MYDGFQ969H8 173 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.96□□□□□ -0.657e-8■■□□□ 12
SNRNP200-201ENST00000323853 NXF3Q9H4D5 531 aaKnown RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 S100A14Q9HCY8 104 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CLN6Q9NWW5 311 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 LGALS13Q9UHV8 139 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 AGO1Q9UL18 857 aaKnown RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 POLR3HQ9Y535 204 aaPredicted RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 PLIN4Q96Q06 1357 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CCNA2P20248 432 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 DCTN2Q13561 401 aaKnown RBP10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 IKBKEQ14164 716 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 GNA13Q14344 377 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 PTPRNQ16849 979 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 CXCL17Q6UXB2 119 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 SALL4Q9UJQ4 1053 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 COMMD3-BMI1R4GMX3 469 aa10.96□□□□□ -0.65
SNRNP200-201ENST00000323853 SMIM35A0A1B0GVV1 85 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 A0A1W2PQH9 124 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 CARNS1A5YM72 827 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 C2orf71A6NGG8 1288 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 KPNA3O00505 521 aaPredicted RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 PDE9AO76083 593 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 LPOP22079 712 aaPredicted RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 MPSTP25325 297 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 GTF2E2P29084 291 aaKnown RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 USP4Q13107 963 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 GK5Q6ZS86 529 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 CCDC149Q6ZUS6 474 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 GBA3Q9H227 469 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 ZFP14Q9HCL3 533 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 MED1Q15648 1581 aaPredicted RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 SPEF2Q9C093 1822 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 SMIM31A0A1B0GVY4 71 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 ULK1O75385 1050 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 GUCA1AP43080 201 aaPredicted RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 CDK18Q07002 472 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC1A5Q15758 541 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 PDZD7Q9H5P4 517 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 NOL6Q9H6R4 1146 aaKnown RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 SSU72Q9NP77 194 aaKnown RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 RSL24D1Q9UHA3 163 aaKnown RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 ITGA2P17301 1181 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 CD52P31358 61 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 XKR6Q5GH73 641 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms