RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 DNAJC3Q13217 504 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 PDE1CQ14123 709 aaPredicted RBP10□□□□□ -0.81
CCDC65-202ENST00000320516 ZNF235Q14590 738 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 PROX2Q3B8N5 592 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 ZNF542PQ5EBM4 170 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 MARC1Q5VT66 337 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 ERAP2Q6P179 960 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 TMPRSS7Q7RTY8 843 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 PARGQ86W56 976 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 GAS2L3Q86XJ1 694 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 MAP7D3Q8IWC1 876 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 MAML1Q92585 1016 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 FATE1Q969F0 183 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 C1QTNF7Q9BXJ2 289 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 NOD2Q9HC29 1040 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 COQ6Q9Y2Z9 468 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 PCDHGA1Q9Y5H4 931 aa10□□□□□ -0.81
CCDC65-202ENST00000320516 KMT2BQ9UMN6 2715 aaPredicted RBP10□□□□□ -0.81
CCDC65-202ENST00000320516 PTPRBP23467 1997 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 C3orf70A6NLC5 250 aaPredicted RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 TMEM110-MUSTN1A8MSY1 372 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 ZNF487B1APH4 448 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 SOCS5O75159 536 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 MAP3K6O95382 1288 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 PROS1P07225 676 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 GM2AP17900 193 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 KDELR1P24390 212 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 ACADVLP49748 655 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 LIG3P49916 1009 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 ZNF75DP51815 510 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 MAXP61244 160 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 YPEL5P62699 121 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 POLR2LP62875 67 aaKnown RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 SEMG2Q02383 582 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 GBE1Q04446 702 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 SLC10A2Q12908 348 aaPredicted RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 EIF2B5Q13144 721 aaKnown RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 ZNF211Q13398 564 aaPredicted RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 IRF4Q15306 451 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 SMAD1Q15797 465 aaKnown RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 WSCD2Q2TBF2 565 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 RALGPS1Q5JS13 557 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 CFAP58Q5T655 872 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 LRRC38Q5VT99 294 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 ALG1LQ6GMV1 187 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 CCNI2Q6ZMN8 369 aaPredicted RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 DPPA4Q7L190 304 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 VSIG1Q86XK7 387 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 OR4C6Q8NH72 309 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 MRFAP1L1Q96HT8 127 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 TSGA13Q96PP4 275 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 RNF157Q96PX1 679 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 DNAJC28Q9NX36 388 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 PNMA8BQ9ULN7 279 aaPredicted RBP9.99□□□□□ -0.81
CCDC65-202ENST00000320516 PCDHGC4Q9Y5F7 938 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 IGF2RP11717 2491 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 PLXNB3Q9ULL4 1909 aa9.99□□□□□ -0.81
CCDC65-202ENST00000320516 TOR1BO14657 336 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 MATN3O15232 486 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 SIGLEC6O43699 453 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 CAPNS1P04632 268 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 C1SP09871 688 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 FECHP22830 423 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 HADHBP55084 474 aaKnown RBP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 HNRNPKP61978 463 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 TRAF2Q12933 501 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 IHHQ14623 411 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 LRRC14Q15048 493 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 LIPIQ6XZB0 460 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 BBS5Q8N3I7 341 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 PLD5Q8N7P1 536 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 KDF1Q8NAX2 398 aaPredicted RBP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 NSMCE1Q8WV22 266 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 SCUBE2Q9NQ36 999 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 DTLQ9NZJ0 730 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 SHROOM3Q8TF72 1996 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 FREM2Q5SZK8 3169 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 TDRD6O60522 2096 aaKnown RBP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 A0A1W2PQ67 120 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 LRRD1A4D1F6 860 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 SCAMP1O15126 338 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 FZD6O60353 706 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 CKMT2P17540 419 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 ACP1P24666 158 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 CCNCP24863 283 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 SLC1A1P43005 524 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 MAGEA1P43355 309 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 PTK2BQ14289 1009 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 IFI16Q16666 785 aaKnown RBP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 ST3GAL2Q16842 350 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 SLC9A4Q6AI14 798 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 TIGD7Q6NT04 549 aaPredicted RBP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 DHRS13Q6UX07 377 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 MACC1Q6ZN28 852 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 CCDC170Q8IYT3 715 aa9.98□□□□□ -0.81
CCDC65-202ENST00000320516 CBARPQ8N350 705 aaPredicted RBP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 ZNF548Q8NEK5 533 aaPredicted RBP9.98□□□□□ -0.81
CCDC65-202ENST00000320516 HDAC11Q96DB2 347 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 352.8 ms