RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CDH17Q12864 832 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 GRTP1Q5TC63 336 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 KCTD11Q693B1 232 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 PTAR1Q7Z6K3 402 aaPredicted RBP15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 STN1Q9H668 368 aaKnown RBP15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 CAAP1Q9H8G2 361 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 CSNK1G1Q9HCP0 422 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 TLK1Q9UKI8 766 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 PLOD2O00469 737 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 ADAMTS4O75173 837 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 GJB3O75712 270 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 SERPINE1P05121 402 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 HLA-DQB2P05538 268 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 PORP16435 677 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 ZNF23P17027 643 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 ZNF26P17031 533 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 TCN1P20061 433 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 ALDH3B2P48448 385 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 LIMK2P53671 638 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 PSMD5Q16401 504 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 GLB1LQ6UWU2 654 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 TIFABQ6ZNK6 161 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 DSELQ8IZU8 1212 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 LZTR1Q8N653 840 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 CCNYL1Q8N7R7 359 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 TMEM102Q8N9M5 508 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 TSPAN18Q96SJ8 248 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 WDR55Q9H6Y2 383 aaPredicted RBP15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 NT5MQ9NPB1 228 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 EPS15L1Q9UBC2 864 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 PSMC3P17980 439 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 PM20D1Q6GTS8 502 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 NAPEPLDQ6IQ20 393 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 SNX32Q86XE0 403 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 ARHGAP12Q8IWW6 846 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 CHERPQ8IWX8 916 aaKnown RBP15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 MARK4Q96L34 752 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 DCUN1D5Q9BTE7 237 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 TBCCD1Q9NVR7 557 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
SHROOM1-201ENST00000319854 PRSS51A0A1B0GVH4 220 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 SCAMP3O14828 347 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 CNTN5O94779 1100 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 ALOX15P16050 662 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 ABCE1P61221 599 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 TGFBIQ15582 683 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 PIGGQ5H8A4 983 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 TBL1YQ9BQ87 522 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 IL22Q9GZX6 179 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 NMRAL1Q9HBL8 299 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 TRHDEQ9UKU6 1024 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 RUVBL2Q9Y230 463 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 HS3ST4Q9Y661 456 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 J3KR12 359 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 AHSGP02765 367 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 RPS27LQ71UM5 84 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 OSBPL6Q9BZF3 934 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 PLGRKTQ9HBL7 147 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 GMIPQ9P107 970 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 THEGQ9P2T0 379 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 E9PAM4 449 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 TADA2AO75478 443 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 SERPINB7O75635 380 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC4A1P02730 911 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 FGFR3P22607 806 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 GABRB3P28472 473 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 RXRGP48443 463 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 NAGLUP54802 743 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 OXCT1P55809 520 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 MGAT5BQ3V5L5 792 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 ZNF470Q6ECI4 717 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 FAM193BQ96PV7 902 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 SEPT5Q99719 369 aaPredicted RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 COQ10BQ9H8M1 238 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 ABCC13Q9NSE7 274 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 OLAHQ9NV23 265 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 IPO11Q9UI26 975 aaKnown RBP15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 WDR37Q9Y2I8 494 aa15.65■□□□□ 0.1
SHROOM1-201ENST00000319854 PRRC2BQ5JSZ5 2229 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 MAFKO60675 156 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 KPNA6O60684 536 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 CSPG5O95196 566 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 PIRTP0C851 137 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 MPSTP25325 297 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 RELAQ04206 551 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 NXNQ6DKJ4 435 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 EPGNQ6UW88 154 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 MRPL10Q7Z7H8 261 aaKnown RBP15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 PGAP3Q96FM1 320 aaPredicted RBP15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 ARMC7Q9H6L4 198 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 ZNHIT2Q9UHR6 403 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 PADI4Q9UM07 663 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 SCN10AQ9Y5Y9 1956 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 PIK3R1P27986 724 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 PLK1P53350 603 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 ALFQ53S48 1182 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 CLLU1OSQ5K130 101 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 FAM171A1Q5VUB5 890 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 IL23RQ5VWK5 629 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms