RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 GOLGA8RI6L899 631 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 J3KR12 359 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 MT-CYBP00156 380 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-201ENST00000317677 KRT4P19013 534 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 PLD1Q13393 1074 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 IHHQ14623 411 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 SMAD1Q15797 465 aaKnown RBP13.16□□□□□ -0.3
CPNE1-201ENST00000317677 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 CERCAMQ5T4B2 595 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 SLC26A11Q86WA9 606 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 CTAGE3PQ8IX95 158 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 ARPC5LQ9BPX5 153 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 RNF38Q9H0F5 515 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 GLOD4Q9HC38 313 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 DDX18Q9NVP1 670 aaKnown RBP13.16□□□□□ -0.3
CPNE1-201ENST00000317677 PADI4Q9UM07 663 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 FAM32AQ9Y421 112 aaKnown RBP13.16□□□□□ -0.3
CPNE1-201ENST00000317677 DENND4CQ5VZ89 1909 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 C2orf78A6NCI8 922 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 IL1BP01584 269 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 FGBP02675 491 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 KLKB1P03952 638 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 INHBAP08476 426 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 PGAM1P18669 254 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 TACR2P21452 398 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 IRX4P78413 519 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 MSLNQ13421 630 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-201ENST00000317677 BMPR2Q13873 1038 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 NEPROQ6NW34 567 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 CYS1Q717R9 158 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 Q7L0L9 218 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 DHDDSQ86SQ9 333 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 CHSY1Q86X52 802 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 BANPQ8N9N5 519 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 ZNF512Q96ME7 567 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-201ENST00000317677 PANX3Q96QZ0 392 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 FCRL5Q96RD9 977 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 NACA2Q9H009 215 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-201ENST00000317677 NPHS2Q9NP85 383 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 DNMT3LQ9UJW3 386 aa13.16□□□□□ -0.3
CPNE1-201ENST00000317677 ERI2A8K979 691 aaKnown RBP13.15□□□□□ -0.3
CPNE1-201ENST00000317677 TEX28O15482 410 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 URODP06132 367 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 TPH1P17752 444 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 S100A1P23297 94 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 ATP5C1P36542 298 aaKnown RBP13.15□□□□□ -0.3
CPNE1-201ENST00000317677 NDST2P52849 883 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 PFKPQ01813 784 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 TWF1Q12792 350 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 MMEL1Q495T6 779 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 DNAL1Q4LDG9 190 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 DENND5AQ6IQ26 1287 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 OR52K2Q8NGK3 314 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 HSPBAP1Q96EW2 488 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 FAM161BQ96MY7 647 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 RPRD1AQ96P16 312 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-201ENST00000317677 KLHL5Q96PQ7 755 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 YME1L1Q96TA2 773 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 CCT7Q99832 543 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 C1orf21Q9H246 121 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 S100A14Q9HCY8 104 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 RBM22Q9NW64 420 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■□□□ 12.8
CPNE1-201ENST00000317677 AK5Q9Y6K8 562 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.15□□□□□ -0.3
CPNE1-201ENST00000317677 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
CPNE1-201ENST00000317677 ZCWPW2A0A1B0GU75 182 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TRIM49D1C9J1S8 452 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 H3BNC9 293 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 CASQ2O14958 399 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ACSL4O60488 711 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 EFCAB14O75071 495 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 BAIAP3O94812 1187 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 CA4P22748 312 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 SLC5A2P31639 672 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ADRA1AP35348 466 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ACVRL1P37023 503 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 NUMBP49757 651 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 SGSHP51688 502 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 NEK2P51955 445 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 SLC18A2Q05940 514 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 NADK2Q4G0N4 442 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 SFT2D3Q587I9 215 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 HECTD3Q5T447 861 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 CFAP52Q8N1V2 620 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 PDZD8Q8NEN9 1154 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
CPNE1-201ENST00000317677 TTC17Q96AE7 1141 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms