RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MARCKSL1P49006 195 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 CXCR3P49682 368 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 CYP4F2P78329 520 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 HIST3H2AQ7L7L0 130 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 HIST1H2ACQ93077 130 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 TLR10Q9BXR5 811 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 BNC2Q6ZN30 1099 aaPredicted RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 ZNF398Q8TD17 642 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 PLD4Q96BZ4 506 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 PCDHGC4Q9Y5F7 938 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 OR2AG2A6NM03 316 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 FAM220BPB1ANY3 271 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 EPN2O95208 641 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 TBX18O95935 607 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 PRKCIP41743 596 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 GSSP48637 474 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 CDH4P55283 916 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 ILF2Q12905 390 aaKnown RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 IRGCQ6NXR0 463 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 UBE2R2Q712K3 238 aaPredicted RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 CNBD2Q96M20 576 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 COMMD8Q9NX08 183 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 SERPINE1P05121 402 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 CHST15Q7LFX5 561 aaPredicted RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 ZCCHC9Q8N567 271 aaKnown RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 UTP15Q8TED0 518 aaKnown RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 C2orf15Q8WU43 125 aaKnown RBP13.56□□□□□ -0.24
RFFL-201ENST00000315249 SYBUQ9NX95 663 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 Q9Y3F1 56 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 KCNE2Q9Y6J6 123 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 KCNU1A8MYU2 1149 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 CDH3P22223 829 aa13.56□□□□□ -0.24
RFFL-201ENST00000315249 CPSF6Q16630 551 aaKnown RBP eCLIP13.56□□□□□ -0.24
RFFL-201ENST00000315249 C9IYK1 514 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 POP4O95707 220 aaKnown RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 IDSP22304 550 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 CLCN5P51795 746 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 GJA9P57773 515 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 WLSQ5T9L3 541 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 TPGS2Q68CL5 300 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 SETD7Q8WTS6 366 aaKnown RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 GPR88Q9GZN0 384 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 CCDC134Q9H6E4 229 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 SNX13Q9Y5W8 968 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 AIF1P55008 147 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 NYAP1Q6ZVC0 841 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 MTDHQ86UE4 582 aaKnown RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 PTGR2Q8N8N7 351 aaPredicted RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 ZNF384Q8TF68 577 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 SNTNA6NMZ2 147 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 RFC2P35250 354 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 ILF3Q12906 894 aaKnown RBP eCLIP13.55□□□□□ -0.247e-7■■□□□ 13.2
RFFL-201ENST00000315249 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 AUHQ13825 339 aaKnown RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 KCTD19Q17RG1 926 aaPredicted RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 PROX1Q92786 737 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 KCTD15Q96SI1 283 aaPredicted RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 HEPHQ9BQS7 1158 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 TMBIM4Q9HC24 238 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 hCG_1818297A0A087WSY0 165 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 SLC25A12O75746 678 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 PFKMP08237 780 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 WARSP23381 471 aaKnown RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 FEN1P39748 380 aaKnown RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 IRX1P78414 480 aaPredicted RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 ALG11Q2TAA5 492 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 TMPRSS11BQ86T26 416 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 OSBPL2Q9H1P3 480 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 VTI1BQ9UEU0 232 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 FLT3P36888 993 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 TAF13Q15543 124 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 CERCAMQ5T4B2 595 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 FAM129CQ86XR2 697 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 DPP10Q8N608 796 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 IRGQQ8WZA9 623 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 ADI1Q9BV57 179 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 GON4LQ3T8J9 2241 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 ARFGEF2Q9Y6D5 1785 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 CCT8L1PA6NM43 557 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 ENPP3O14638 875 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 ITGAVP06756 1048 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 RHOQP17081 205 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 HOXB8P17481 243 aaPredicted RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 KCNA5P22460 613 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 ATXN7L2Q5T6C5 722 aaPredicted RBP13.55□□□□□ -0.24
RFFL-201ENST00000315249 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 SLC4A11Q8NBS3 891 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 ASZ1Q8WWH4 475 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 APOPT1Q96IL0 206 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 CSPG4P5Q96PW8 444 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 SLC39A8Q9C0K1 460 aa13.55□□□□□ -0.24
RFFL-201ENST00000315249 RUNX1T1Q06455 604 aa13.54□□□□□ -0.24
RFFL-201ENST00000315249 TRIP4Q15650 581 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms