RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 RAB7BQ96AH8 199 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 TSGA10Q9BZW7 698 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 CDV3Q9UKY7 258 aaKnown RBP17.25■□□□□ 0.35
PUF60-201ENST00000313352 RAI2Q9Y5P3 530 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 POM121BA6NF01 834 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 TM4SF5O14894 197 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 TSPAN6O43657 245 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 PTPN3P26045 913 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 MMP12P39900 470 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 RPS21P63220 83 aaKnown RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 FAM193AP78312 1265 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 OTUD4Q01804 1114 aaKnown RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 WASHC5Q12768 1159 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 GRM3Q14832 879 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 SETMARQ53H47 684 aaPredicted RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 BRAT1Q6PJG6 821 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 GCNT7Q6ZNI0 430 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 SPATS2Q86XZ4 545 aaKnown RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 ACTL9Q8TC94 416 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 BMFQ96LC9 184 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 C1QTNF2Q9BXJ5 285 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 GAREM1Q9H706 876 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 MBNL1Q9NR56 388 aaKnown RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 DLL3Q9NYJ7 618 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 CHKBQ9Y259 395 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 PRR5-ARHGAP8B1AHC4 643 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 PPP1R12AO14974 1030 aaPredicted RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 PRLP01236 227 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 CTPS1P17812 591 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 XPAP23025 273 aaPredicted RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 CD68P34810 354 aaPredicted RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 CD86P42081 329 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 NR2C2P49116 596 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 ATXN3P54252 364 aaPredicted RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 ARHGAP8P85298 464 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 IL9RQ01113 521 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 TPRG1LQ5T0D9 272 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 KIAA1161Q6NSJ0 714 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 RABEPKQ7Z6M1 372 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 PAF1Q8N7H5 531 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 SPATA22Q8NHS9 363 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 HCAR2Q8TDS4 363 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 TFB1MQ8WVM0 346 aaKnown RBP17.24■□□□□ 0.35
PUF60-201ENST00000313352 BRD8Q9H0E9 1235 aa17.24■□□□□ 0.35
PUF60-201ENST00000313352 ASCC3Q8N3C0 2202 aaKnown RBP17.23■□□□□ 0.35
PUF60-201ENST00000313352 SPTBN4Q9H254 2564 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.23■□□□□ 0.35
PUF60-201ENST00000313352 PRAMEF26H0Y7S4 382 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 APOC4-APOC2K7ER74 178 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 SLC30A4O14863 429 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 VILLO15195 856 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 FZD6O60353 706 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 PGLSO95336 258 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 APOC2P02655 101 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 SYPP08247 313 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 ALPIP09923 528 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 GM2AP17900 193 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 HNRNPA2B1P22626 353 aaKnown RBP17.23■□□□□ 0.35
PUF60-201ENST00000313352 CTSKP43235 329 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 ID4P47928 161 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 LIG3P49916 1009 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 COPS2P61201 443 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 SKOR1P84550 965 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 GSE1Q14687 1217 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 NOMO1Q15155 1222 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 TMEM52BQ4KMG9 183 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 ZNF662Q6ZS27 426 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 KDELC2Q7Z4H8 507 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 TSPAN33Q86UF1 283 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 SLC22A18ASQ8N1D0 253 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 OR13H1Q8NG92 308 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 PIH1D2Q8WWB5 315 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 RBM15Q96T37 977 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■■■■■ 31.7
PUF60-201ENST00000313352 B4GALT6Q9UBX8 382 aa17.23■□□□□ 0.35
PUF60-201ENST00000313352 R3HDM2Q9Y2K5 976 aaKnown RBP17.23■□□□□ 0.35
PUF60-201ENST00000313352 MIF4GDA9UHW6 222 aaKnown RBP17.22■□□□□ 0.35
PUF60-201ENST00000313352 NEBLO76041 1014 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 MT-CYBP00156 380 aaPredicted RBP17.22■□□□□ 0.35
PUF60-201ENST00000313352 CPP00450 1065 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 C6P13671 934 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 LHCGRP22888 699 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 RBL1P28749 1068 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 PTPN7P35236 360 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 LIMK1P53667 647 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 STAT4Q14765 748 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 TEX44Q53QW1 395 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 MEI1Q5TIA1 1274 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 NYAP1Q6ZVC0 841 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 REXO1L1PQ8IX06 675 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 PELI3Q8N2H9 469 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 UBL4BQ8N7F7 174 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 CXorf40AQ8TE69 158 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 FUBP1Q96AE4 644 aaKnown RBP17.22■□□□□ 0.35
PUF60-201ENST00000313352 CENPTQ96BT3 561 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 CAMK1GQ96NX5 476 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 TDRD1Q9BXT4 1180 aaKnown RBP17.22■□□□□ 0.35
PUF60-201ENST00000313352 UBP1Q9NZI7 540 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 DMTF1Q9Y222 760 aa17.22■□□□□ 0.35
PUF60-201ENST00000313352 NPIPB15A6NHN6 443 aaPredicted RBP17.21■□□□□ 0.35
PUF60-201ENST00000313352 TLR4O00206 839 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms