RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 ANKRD53Q8N9V6 530 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 GRIN3AQ8TCU5 1115 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 DNAJB3Q8WWF6 145 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 NT5C3BQ969T7 300 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ZNF408Q9H9D4 720 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 MAGEE1Q9HCI5 957 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 POLE4Q9NR33 117 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 EMC3Q9P0I2 261 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 IGSF9Q9P2J2 1179 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 CACNG4Q9UBN1 327 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 KLQ9UEF7 1012 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 PFDN2Q9UHV9 154 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 AP4B1Q9Y6B7 739 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 HNRNPCL1O60812 293 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 AVILO75366 819 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 PDGFRAP16234 1089 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 MFSD10Q14728 455 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 SULT1C3Q6IMI6 304 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ADGRD1Q6QNK2 874 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ARCQ7LC44 396 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 CCDC185Q8N715 623 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 OR5H6Q8NGV6 325 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 SHKBP1Q8TBC3 707 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 C10orf82Q8WW14 230 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 NDRG1Q92597 394 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 NXPE3Q969Y0 559 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 FAM49AQ9H0Q0 323 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 TOR3AQ9H497 397 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ALG13Q9NP73 1137 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 TMPRSS4Q9NRS4 437 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 UBA2Q9UBT2 640 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 CPA4Q9UI42 421 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 PLXNA3P51805 1871 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 MDM4O15151 490 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ASNA1O43681 348 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 BTF3P20290 206 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 CD247P20963 164 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ABCG1P45844 678 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ST13P50502 369 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 PDIA2Q13087 525 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 SETD3Q86TU7 594 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 PRPF39Q86UA1 669 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ULK2Q8IYT8 1036 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 CPA6Q8N4T0 437 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 KCTD6Q8NC69 237 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ST8SIA2Q92186 375 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 RBM14Q96PK6 669 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 IFT22Q9H7X7 185 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 TCF7L2Q9NQB0 619 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 SMYD2Q9NRG4 433 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 IGSF5Q9NSI5 407 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 KANSL3Q9P2N6 904 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 SLC7A8Q9UHI5 535 aa9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 APOBEC2Q9Y235 224 aaKnown RBP9.6□□□□□ -0.87
RBFOX1-201ENST00000311745 ZNF487B1APH4 448 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 H0YC42 278 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 DYNC1LI2O43237 492 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 RSL1D1O76021 490 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 HSMCR30P0CW71 290 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 RAG1P15918 1043 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 RPA3P35244 121 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 TPD52P55327 224 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 EIF3EP60228 445 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 BEX3Q00994 111 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 TMED2Q15363 201 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 TAF1CQ15572 869 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 FGD3Q5JSP0 725 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 RWDD4Q6NW29 188 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 CD300LGQ6UXG3 332 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 DPP9Q86TI2 863 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 TLK2Q86UE8 772 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 EFCAB3Q8N7B9 438 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 TBC1D15Q8TC07 691 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 KCTD15Q96SI1 283 aaPredicted RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 TRIM56Q9BRZ2 755 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 HOXD1Q9GZZ0 328 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 C12orf65Q9H3J6 166 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 KLK14Q9P0G3 267 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 CYB5R1Q9UHQ9 305 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 HMX2A2RU54 273 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 RRN3P2A6NIE6 340 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 MTSS1O43312 755 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 M6PRP20645 277 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 FKBP1BP68106 108 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 SPARCL1Q14515 664 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 DPYSL2Q16555 572 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 FAM209BQ5JX69 171 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 GPR107Q5VW38 600 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 C17orf99Q6UX52 265 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 IDO2Q6ZQW0 420 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 IGFN1Q86VF2 1251 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 RFX6Q8HWS3 928 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 AADATQ8N5Z0 425 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 FBXO36Q8NEA4 188 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 ACSS3Q9H6R3 686 aa9.59□□□□□ -0.87
RBFOX1-201ENST00000311745 RSAD1Q9HA92 442 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms