RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 DSEQ9UL01 958 aa14.77□□□□□ -0.05
COL6A2-202ENST00000310645 ZNF701M0R085 212 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 SUPT7LO94864 414 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 NPY2RP49146 381 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 TPI1P60174 286 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 SEPT8Q92599 483 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 C18orf25Q96B23 403 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 TBC1D13Q9NVG8 400 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 IFT80Q9P2H3 777 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 MTF2Q9Y483 593 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 ST14Q9Y5Y6 855 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 NPHS1O60500 1241 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 MT-CYBP00156 380 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 PSMD8P48556 350 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 SLC25A52Q3SY17 297 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 ZNF618Q5T7W0 954 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 ZNF470Q6ECI4 717 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 STRADAQ7RTN6 431 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 SLC15A3Q8IY34 581 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 NPWQ8N729 165 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 MFSD2AQ8NA29 543 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 PCYOX1LQ8NBM8 494 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 TAMM41Q96BW9 452 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 HNRNPABQ99729 332 aaKnown RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 PIGVQ9NUD9 493 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 A0A0J9YYE9 177 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 MAGEB16A2A368 324 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 GSTT2P0CG29 244 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 GSTT2BP0CG30 244 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 CES1P23141 567 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 EEF1DP29692 281 aaKnown RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 HADHAP40939 763 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 CXCL9Q07325 125 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 CDH17Q12864 832 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 RBM20Q5T481 1227 aaKnown RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 DCLRE1AQ6PJP8 1040 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 FUNDC1Q8IVP5 155 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 ZNF420Q8TAQ5 688 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 DNAJB14Q8TBM8 379 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 CENPNQ96H22 339 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 MPHOSPH6Q99547 160 aaKnown RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 MRPL57Q9BQC6 102 aaKnown RBP14.76□□□□□ -0.05
COL6A2-202ENST00000310645 CCDC68Q9H2F9 335 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 LRRC4Q9HBW1 653 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 ARMC1Q9NVT9 282 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 TRAF6Q9Y4K3 522 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 SHROOM3Q8TF72 1996 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 ANK1P16157 1881 aa14.76□□□□□ -0.05
COL6A2-202ENST00000310645 SIP14410 1827 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 IGKV6-21A0A0C4DH24 114 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 ANGPT2O15123 496 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 ESRRBO95718 433 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 INHBBP09529 407 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 ACADVLP49748 655 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 OAZ1P54368 228 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 BCAT1P54687 386 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 MTA1Q13330 715 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 NIPAL1Q6NVV3 410 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 BTLAQ7Z6A9 289 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 CHPT1Q8WUD6 406 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 C3orf30Q96M34 536 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 GPR20Q99678 358 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 ING2Q9H160 280 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 SACM1LQ9NTJ5 587 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 CLDN5O00501 218 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 IDO1P14902 403 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 TTKP33981 857 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 CAPGP40121 348 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 MLLT10P55197 1068 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 RPS6KA2Q15349 733 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 HFE2Q6ZVN8 426 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 SAMD7Q7Z3H4 446 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 IGFN1Q86VF2 1251 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 RYBPQ8N488 228 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 GLT1D1Q96MS3 346 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 AGPAT4Q9NRZ5 378 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 COL11A1P12107 1806 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 SOWAHBA6NEL2 793 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 A8MT66 165 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 TOR1BO14657 336 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 SPTLC1O15269 473 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 PGK2P07205 417 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 FRG1Q14331 258 aaKnown RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 INTS11Q5TA45 600 aaKnown RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 PDZD4Q76G19 769 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 CTU1Q7Z7A3 348 aaKnown RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 DNERQ8NFT8 737 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 ZC3H15Q8WU90 426 aaKnown RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 SGCDQ92629 289 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 GBA3Q9H227 469 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 EML4Q9HC35 981 aaKnown RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 SMPD3Q9NY59 655 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-202ENST00000310645 SLC27A5Q9Y2P5 690 aa14.75□□□□□ -0.05
COL6A2-202ENST00000310645 KDM1AO60341 852 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 SNAP91O60641 907 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 BAIAP3O94812 1187 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 SLC1A2P43004 574 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 KCTD11Q693B1 232 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 PIWIL3Q7Z3Z3 882 aaKnown RBP14.74□□□□□ -0.05
COL6A2-202ENST00000310645 NIM1KQ8IY84 436 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms