RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 HMG20AQ9NP66 347 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 IL1RAPQ9NPH3 570 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CAB39Q9Y376 341 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 PCDHGB7Q9Y5F8 929 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 KDM4FA0A1W2PPD8 638 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SRRM3A6NNA2 597 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ADM5C9JUS6 153 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 BIRC5O15392 142 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 STAU1O95793 577 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ABHD2P08910 425 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ALDH18A1P54886 795 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NTRK3Q16288 839 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MROH9Q5TGP6 573 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CAPN13Q6MZZ7 669 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 AHI1Q8N157 1196 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 VGLL2Q8N8G2 317 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HAVCR1Q96D42 359 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CERS2Q96G23 380 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PDLIM2Q96JY6 352 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TRMT61BQ9BVS5 477 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZNHIT2Q9UHR6 403 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ATG2BQ96BY7 2078 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RGPD2P0DJD1 1756 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 BTAF1O14981 1849 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 A0A0J9YVX5 310 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 E9PBE3 544 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GTPBP1O00178 669 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MPZL2O60487 215 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SEC22BO75396 215 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PSMD10O75832 226 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MED26O95402 600 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MBTD1Q05BQ5 628 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF211Q13398 564 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FBXO46Q6PJ61 603 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ADCK1Q86TW2 530 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DSELQ8IZU8 1212 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HORMAD2Q8N7B1 307 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 WDR60Q8WVS4 1066 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ACOT12Q8WYK0 555 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HERVK_113Q902F9 699 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RNFT2Q96EX2 444 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF668Q96K58 619 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CLCC1Q96S66 551 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZSCAN5AQ9BUG6 496 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RNPEPQ9H4A4 650 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PADI3Q9ULW8 664 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DUSP12Q9UNI6 340 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PCDHGA11Q9Y5H2 935 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SPTBP11277 2137 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 LAMB1P07942 1786 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MYO1GB0I1T2 1018 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TM7SF2O76062 418 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RHOQP17081 205 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HRH2P25021 359 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CBX5P45973 191 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CNTN2Q02246 1040 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 KDSRQ06136 332 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CDK18Q07002 472 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NFYCQ13952 458 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NEPROQ6NW34 567 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 IYDQ6PHW0 289 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 LCLAT1Q6UWP7 414 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SKAP1Q86WV1 359 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ARID3BQ8IVW6 561 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PIK3C3Q8NEB9 887 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 KLHL6Q8WZ60 621 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NR4A3Q92570 626 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NXPE3Q969Y0 559 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 VMP1Q96GC9 406 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CHP1Q99653 195 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PRMT1Q99873 361 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SESN1Q9Y6P5 492 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PEAK1Q9H792 1746 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SPTBN1Q01082 2364 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 LRP6O75581 1613 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 A0A087X0T9 212 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FAM237AA0A1B0GTK4 181 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SOBPA7XYQ1 873 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 F8VP50 259 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SNAP91O60641 907 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DAB1O75553 588 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 IGHEP01854 428 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SNHG28P0DPA3 235 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ARF4P18085 180 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GNAZP19086 355 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SLC6A2P23975 617 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DNAJB1P25685 340 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 L1CAMP32004 1257 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 S100A3P33764 101 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ABRQ12979 859 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RCN1Q15293 331 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GPR33Q49SQ1 333 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ERICH5Q6P6B1 374 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PAOXQ6QHF9 649 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 KLHL24Q6TFL4 600 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 KRT74Q7RTS7 529 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 C11orf96Q7Z7L8 435 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RASAL3Q86YV0 1011 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 C19orf18Q8NEA5 215 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms