RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GK5Q6ZS86 529 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 BEND5Q7L4P6 421 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 DHDDSQ86SQ9 333 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 SCML4Q8N228 414 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PGBD5Q8N414 524 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PCDH20Q8N6Y1 951 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 OR7D4Q8NG98 312 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 OR13J1Q8NGT2 312 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 CALML6Q8TD86 181 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 SLC39A13Q96H72 371 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 CCDC167Q9P0B6 97 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 VWA7Q9Y334 891 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PEX11BO96011 259 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 SCNN1BP51168 640 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 DSC1Q08554 894 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 PPP1R3AQ16821 1122 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 TRIM71Q2Q1W2 868 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 RSPO2Q6UXX9 243 aaPredicted RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 UMODL1-AS1Q8N2C9 162 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 GABPB2Q8TAK5 448 aaPredicted RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 SMIM14Q96QK8 99 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 TRPM7Q96QT4 1865 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 A8MT66 165 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 MUSKO15146 869 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 AOC2O75106 756 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 ALDH2P05091 517 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 LTA4HP09960 611 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 COL6A2P12110 1019 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 THOP1P52888 689 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 CDKN2DP55273 166 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 FLOT2Q14254 428 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 LBRQ14739 615 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 METTL21CQ5VZV1 264 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 TMEM173Q86WV6 379 aaPredicted RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 CNTN4Q8IWV2 1026 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 ARHGAP18Q8N392 663 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 RAET1EQ8TD07 263 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 ECSITQ9BQ95 431 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 RTKNQ9BST9 563 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 VCXQ9H320 206 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 TNFRSF12AQ9NP84 129 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 ADAMTS6Q9UKP5 1117 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 FAM50BQ9Y247 325 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 PCDHB7Q9Y5E2 793 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 COPG1Q9Y678 874 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 A0A087X1B8 175 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 EOMESO95936 686 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 NDST2P52849 883 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 RPS24P62847 133 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 CCSAPQ6IQ19 270 aaPredicted RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 BNC2Q6ZN30 1099 aaPredicted RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 PIWIL4Q7Z3Z4 852 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 CILP2Q8IUL8 1156 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 KDM1BQ8NB78 822 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 GDPD5Q8WTR4 605 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 FUBP3Q96I24 572 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 C1orf74Q96LT6 269 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 POLR1EQ9GZS1 481 aaKnown RBP11.61□□□□□ -0.55
PTPN2-201ENST00000309660 CLIC5Q9NZA1 410 aa11.61□□□□□ -0.55
PTPN2-201ENST00000309660 EME2A4GXA9 379 aaPredicted RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 TARM1B6A8C7 271 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 F5H5T6 163 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 CCNT2O60583 730 aaKnown RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 TSPAN3O60637 253 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 IPO13O94829 963 aaKnown RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 HTR7P34969 479 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 SP3Q02447 781 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 MAP3K21Q5TCX8 1036 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 C8orf48Q96LL4 319 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 PPP1R2P1Q96PQ5 205 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 EBF3Q9H4W6 596 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 TRPC7Q9HCX4 862 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 PRDM5Q9NQX1 630 aaPredicted RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 IGSF5Q9NSI5 407 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 TMEM248Q9NWD8 314 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 A0A0U1RQS6 177 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 MTMR11A4FU01 709 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 SIX3O95343 332 aaPredicted RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 MMP2P08253 660 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 XRCC1P18887 633 aaPredicted RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 ARL1P40616 181 aaPredicted RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 TRIP4Q15650 581 aaPredicted RBP11.6□□□□□ -0.55
PTPN2-201ENST00000309660 RNF220Q5VTB9 566 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 IRGCQ6NXR0 463 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 RNF111Q6ZNA4 994 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 CUZD1Q86UP6 607 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 SPATA24Q86W54 205 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 EFHBQ8N7U6 833 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 SERPINI1Q99574 410 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 VPS45Q9NRW7 570 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 VTI1BQ9UEU0 232 aa11.6□□□□□ -0.55
PTPN2-201ENST00000309660 NCF1BA6NI72 391 aaPredicted RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 NCF1CA8MVU1 366 aaPredicted RBP11.59□□□□□ -0.55
PTPN2-201ENST00000309660 C9JVG2 144 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms