RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 GJB3O75712 270 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 ECEL1O95672 775 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 NDST3O95803 873 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3HP0C7X1 549 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 METAP1P53582 386 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 GDF10P55107 478 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 WHAMMP3Q1A5X7 153 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 KIAA0895LQ68EN5 471 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3GQ6DHY5 549 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3CQ6IPX1 549 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 TBC1D3Q8IZP1 549 aaPredicted RBP18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 FAM160A2Q8N612 972 aaPredicted RBP18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 PIH1D2Q8WWB5 315 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 SCRN2Q96FV2 425 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 MCCC1Q96RQ3 725 aaPredicted RBP18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 LYSMD1Q96S90 227 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 C1QTNF7Q9BXJ2 289 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 LRRC40Q9H9A6 602 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 PCDH12Q9NPG4 1184 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 PCYOX1Q9UHG3 505 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 DMTF1Q9Y222 760 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 PCDHGA5Q9Y5G8 931 aa18.01■□□□□ 0.47
SSSCA1-201ENST00000309328 A0A0J9YYE9 177 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 TTC24A2A3L6 582 aaPredicted RBP18■□□□□ 0.47
SSSCA1-201ENST00000309328 METTL12A8MUP2 240 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 ANKRD66B4E2M5 251 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 PSMD11O00231 422 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 RNGTTO60942 597 aaKnown RBP18■□□□□ 0.47
SSSCA1-201ENST00000309328 PCDH8O95206 1070 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 TRBC1P01850 177 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 FGF1P05230 155 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 ZNF30P17039 623 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 PSMB4P28070 264 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 MMP12P39900 470 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 WNT3AP56704 352 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 TAS2R38P59533 333 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 TMEM52BQ4KMG9 183 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 SETMARQ53H47 684 aaPredicted RBP18■□□□□ 0.47
SSSCA1-201ENST00000309328 LAIR1Q6GTX8 287 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 KDELC1Q6UW63 502 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 PRR23BQ6ZRT6 265 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 DPPA4Q7L190 304 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 ZNF572Q7Z3I7 529 aaPredicted RBP18■□□□□ 0.47
SSSCA1-201ENST00000309328 LINC00523Q86TU6 105 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 HORMAD1Q86X24 394 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18■□□□□ 0.47
SSSCA1-201ENST00000309328 SPATA22Q8NHS9 363 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 CXorf40AQ8TE69 158 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 ASB12Q8WXK4 309 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 MLPHQ9BV36 600 aaPredicted RBP18■□□□□ 0.47
SSSCA1-201ENST00000309328 SUSD2Q9UGT4 822 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 CHKBQ9Y259 395 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 ZBTB32Q9Y2Y4 487 aaPredicted RBP18■□□□□ 0.47
SSSCA1-201ENST00000309328 R4GN57 208 aa18■□□□□ 0.47
SSSCA1-201ENST00000309328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 LOC285095A0A1B0GVY8 99 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 MEI4A8MW99 385 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 C10orf142B7Z368 130 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 E7EVH7 732 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 AP3B1O00203 1094 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 NDC80O14777 642 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 LATO43561 262 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 PMPCBO75439 489 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 URI1O94763 535 aaPredicted RBP17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 MT-CYBP00156 380 aaPredicted RBP17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 BCKDHBP21953 392 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 ABL2P42684 1182 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 CDK16Q00536 496 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 ARHGEF7Q14155 803 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 LYSMD4Q5XG99 296 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 NAPEPLDQ6IQ20 393 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 MNS1Q8NEH6 495 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 FAM174AQ8TBP5 190 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 DNASE2BQ8WZ79 361 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 RMDN1Q96DB5 314 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 OXNAD1Q96HP4 312 aaPredicted RBP17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 NSMCE3Q96MG7 304 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 HSPA12BQ96MM6 686 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 TRIB3Q96RU7 358 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 TRABDQ9H4I3 376 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 CD93Q9NPY3 652 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 HACD3Q9P035 362 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 SMG5Q9UPR3 1016 aaKnown RBP17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 INVSQ9Y283 1065 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 MUC6Q6W4X9 2439 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 SHROOM3Q8TF72 1996 aa17.99■□□□□ 0.47
SSSCA1-201ENST00000309328 PLXND1Q9Y4D7 1925 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 CAPN8A6NHC0 703 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 FAM47DPA6NHR8 397 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 PROB1E7EW31 1015 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 PLK4O00444 970 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 AP2A1O95782 977 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 PRLP01236 227 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 GNSP15586 552 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 CD27P26842 260 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 VIPR1P32241 457 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 KCNJ1P48048 391 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 FAM193AP78312 1265 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms