RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ANKS6Q68DC2 871 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 TCTN3Q6NUS6 607 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 C16orf46Q6P387 395 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 GDPD4Q6W3E5 623 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 MAMDC2Q7Z304 686 aaPredicted RBP11.93□□□□□ -0.5
SMIM4-201ENST00000307106 FAM129CQ86XR2 697 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 ARHGEF19Q8IW93 802 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 FAM114A1Q8IWE2 563 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
SMIM4-201ENST00000307106 NRSN1Q8IZ57 195 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 UNC5BQ8IZJ1 945 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 ZNF606Q8WXB4 792 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 OR1E3Q8WZA6 343 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 STARD8Q92502 1023 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 TMEM168Q9H0V1 697 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 MRPL40Q9NQ50 206 aaKnown RBP11.93□□□□□ -0.5
SMIM4-201ENST00000307106 OCIAD1Q9NX40 245 aa11.93□□□□□ -0.5
SMIM4-201ENST00000307106 ARMCX3Q9UH62 379 aaPredicted RBP11.93□□□□□ -0.5
SMIM4-201ENST00000307106 TTLL8A6PVC2 850 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 RHPN2P1A8MT19 583 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 ZW10O43264 779 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 THAP12O43422 761 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 DAB1O75553 588 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 POP4O95707 220 aaKnown RBP11.92□□□□□ -0.5
SMIM4-201ENST00000307106 DDAH2O95865 285 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 GSRP00390 522 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 PCCBP05166 539 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 MAP4P27816 1152 aaKnown RBP11.92□□□□□ -0.5
SMIM4-201ENST00000307106 CXCR3P49682 368 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 COPB1P53618 953 aaKnown RBP11.92□□□□□ -0.5
SMIM4-201ENST00000307106 MAZP56270 477 aaKnown RBP11.92□□□□□ -0.5
SMIM4-201ENST00000307106 RAB15P59190 212 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 FKBP3Q00688 224 aaKnown RBP11.92□□□□□ -0.5
SMIM4-201ENST00000307106 GCNT1Q02742 428 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 MYLK3Q32MK0 819 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 FAM183BPQ6ZVS7 135 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 ASB18Q6ZVZ8 466 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 ZNF438Q7Z4V0 828 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 CCDC13Q8IYE1 715 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 OR56A4Q8NGH8 313 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 CCL4L1Q8NHW4 92 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 LMO3Q8TAP4 145 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 KIAA1524Q8TCG1 905 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 CPT1CQ8TCG5 803 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 KREMEN1Q96MU8 473 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 CPXM1Q96SM3 734 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 INTS2Q9H0H0 1204 aaKnown RBP11.92□□□□□ -0.5
SMIM4-201ENST00000307106 FGF22Q9HCT0 170 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 ZNF212Q9UDV6 495 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 KCTD3Q9Y597 815 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 KCNMB2Q9Y691 235 aa11.92□□□□□ -0.5
SMIM4-201ENST00000307106 TMEM202A6NGA9 273 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 B4E171 279 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 SRGAP2O75044 1071 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 THRAP10827 490 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 TIMP2P16035 220 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 TFE3P19532 575 aaPredicted RBP11.91□□□□□ -0.5
SMIM4-201ENST00000307106 MPSTP25325 297 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 CD1CP29017 333 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 GNA15P30679 374 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 ACVRL1P37023 503 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 TSPAN7P41732 249 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 ABHD18Q0P651 414 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 ELP6Q0PNE2 266 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 MTM1Q13496 603 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 NR1D2Q14995 579 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 TMEM52BQ4KMG9 183 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 CRTC2Q53ET0 693 aaPredicted RBP11.91□□□□□ -0.5
SMIM4-201ENST00000307106 ATXN7L2Q5T6C5 722 aaPredicted RBP11.91□□□□□ -0.5
SMIM4-201ENST00000307106 OLFML1Q6UWY5 402 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 C11orf57Q6ZUT1 292 aaPredicted RBP11.91□□□□□ -0.5
SMIM4-201ENST00000307106 KDELC2Q7Z4H8 507 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 SRRM1Q8IYB3 904 aaKnown RBP11.91□□□□□ -0.5
SMIM4-201ENST00000307106 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 ARHGEF2Q92974 986 aaKnown RBP11.91□□□□□ -0.5
SMIM4-201ENST00000307106 RTP4Q96DX8 246 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 C1orf74Q96LT6 269 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 TEFMQ96QE5 360 aaKnown RBP11.91□□□□□ -0.5
SMIM4-201ENST00000307106 TSG101Q99816 390 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 SPRY4Q9C004 299 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 ACP6Q9NPH0 428 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 CASS4Q9NQ75 786 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 CNTN6Q9UQ52 1028 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 HPSEQ9Y251 543 aa11.91□□□□□ -0.5
SMIM4-201ENST00000307106 CXorf51AA0A1B0GTR3 108 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 CACNB4O00305 520 aaPredicted RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 PMM2O15305 246 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 CLDN1O95832 211 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 XPAP23025 273 aaPredicted RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 CMA1P23946 247 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 CSF2RBP32927 897 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 SYKP43405 635 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 SULT1E1P49888 294 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 GEMIN4P57678 1058 aaKnown RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 KIAA1024LP59773 190 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 RAD51Q06609 339 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 CETN1Q12798 172 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 BIRC2Q13490 618 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms