RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 EXT2Q93063 718 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 ATP6V1E2Q96A05 226 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 DGCR14Q96DF8 476 aaKnown RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 PKMYT1Q99640 499 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 MRPS26Q9BYN8 205 aaKnown RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 PTTG2Q9NZH5 202 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 PADI3Q9ULW8 664 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 GIT1Q9Y2X7 761 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 AP4B1Q9Y6B7 739 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 COL4A4P53420 1690 aaPredicted RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 NPHS1O60500 1241 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 RNASEH2AO75792 299 aaKnown RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 TNFAIP8O95379 198 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 HAPLN1P10915 354 aaPredicted RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 GPR15P49685 360 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 ARSDP51689 593 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 CDKL1Q00532 357 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 POU4F1Q01851 419 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 DSC2Q02487 901 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 ZNF33AQ06730 810 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 PTPRCAPQ14761 206 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 FAM83EQ2M2I3 478 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 TECRLQ5HYJ1 363 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 IL23RQ5VWK5 629 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 IYDQ6PHW0 289 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 PAOXQ6QHF9 649 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 CUZD1Q86UP6 607 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 GPR152Q8TDT2 470 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 PDCD6IPQ8WUM4 868 aaKnown RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 MAELQ96JY0 434 aaKnown RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 FBRSL1Q9HCM7 1045 aaKnown RBP15.22■□□□□ 0.03
CSDC2-201ENST00000306149 CRYL1Q9Y2S2 319 aa15.22■□□□□ 0.03
CSDC2-201ENST00000306149 HTTP42858 3142 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 GLTPD2A6NH11 291 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 TRPC5OSA6NMA1 111 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CNTN5O94779 1100 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CSPG5O95196 566 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CLPTM1O96005 669 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 TFAP2AP05549 437 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 PSME3P61289 254 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CREB5Q02930 508 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 MAP7Q14244 749 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 PIK3R6Q5UE93 754 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 TMEM207Q6UWW9 146 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 ARHGAP22Q7Z5H3 698 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 SPATA2LQ8IUW3 424 aaPredicted RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 RTL3Q8N8U3 475 aaKnown RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 RSPH1Q8WYR4 309 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 MRPL1Q9BYD6 325 aaKnown RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 SENP6Q9GZR1 1112 aaPredicted RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 ALG9Q9H6U8 611 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 MARCH4Q9P2E8 410 aaPredicted RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 GMPR2Q9P2T1 348 aaKnown RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 PCDHGA7Q9Y5G6 932 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 A0A087X1B8 175 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 FGF10O15520 208 aaPredicted RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 IPO13O94829 963 aaKnown RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 SLC4A1P02730 911 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 ATP6V1B1P15313 513 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CYP2C18P33260 490 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 ETFBP38117 255 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 THPOP40225 353 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 POLD2P49005 469 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CDKN2DP55273 166 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CDH13P55290 713 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 DDR2Q16832 855 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 USP41Q3LFD5 358 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 BRMS1LQ5PSV4 323 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 GPR158Q5T848 1215 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 CYP2R1Q6VVX0 501 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 PELI3Q8N2H9 469 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 RYBPQ8N488 228 aaPredicted RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 OR13J1Q8NGT2 312 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 HMCESQ96FZ2 354 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 SLC39A3Q9BRY0 314 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 SMOC2Q9H3U7 446 aa15.21■□□□□ 0.03
CSDC2-201ENST00000306149 ABI2Q9NYB9 513 aaPredicted RBP15.21■□□□□ 0.03
CSDC2-201ENST00000306149 FBP2O00757 339 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 UBFD1O14562 309 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 TNFRSF10BO14763 440 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 CELF2O95319 508 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 TBX18O95935 607 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 NME5P56597 212 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 NRF1Q16656 503 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 SLC39A12Q504Y0 691 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 ALFQ53S48 1182 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 PITRM1Q5JRX3 1037 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 HECTD2Q5U5R9 776 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 ARMC3Q5W041 872 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 KDELC1Q6UW63 502 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 LZTR1Q8N653 840 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 HDAC10Q969S8 669 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 NMD3Q96D46 503 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 LZTS1Q9Y250 596 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 PPP6CO00743 305 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 VILLO15195 856 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 UBDO15205 165 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 SUPT7LO94864 414 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms