RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RAG1P15918 1043 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 HLA-DPA1P20036 260 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 MZF1P28698 734 aaPredicted RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 CCR10P46092 362 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 SCNN1BP51168 640 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 ZBTB16Q05516 673 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 SLC20A2Q08357 652 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 SEMA3AQ14563 771 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 VWA5B1Q5TIE3 1220 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 FAM91A1Q658Y4 838 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 HS6ST3Q8IZP7 471 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 OR13C4Q8NGS5 318 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 OR6P1Q8NGX9 317 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 BRSK1Q8TDC3 778 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 ZBED2Q9BTP6 218 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CINPQ9BW66 212 aaPredicted RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 GATA5Q9BWX5 397 aaPredicted RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 TBC1D10AQ9BXI6 508 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 IGSF5Q9NSI5 407 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP47-201ENST00000305481 PCDHB12Q9Y5F1 795 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 INSIG1O15503 277 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 TBL1XO60907 577 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 KLHL2O95198 593 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 WISP3O95389 354 aaPredicted RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 ATP6V1G2O95670 118 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 NDST3O95803 873 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CTSAP10619 480 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 ALOX15P16050 662 aaPredicted RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 HDCP19113 662 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CRABP2P29373 138 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 IDH3AP50213 366 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CDKN2DP55273 166 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CYP4F8P98187 520 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 TIAL1Q01085 375 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP47-201ENST00000305481 POU4F1Q01851 419 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 USP4Q13107 963 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 KRT72Q14CN4 511 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 PTPRRQ15256 657 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 LRRC8EQ6NSJ5 796 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 LILRA6Q6PI73 481 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 TMEM207Q6UWW9 146 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 GALNT7Q86SF2 657 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 ZNF781Q8N8C0 355 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 HEXDCQ8WVB3 486 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 ALG14Q96F25 216 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 FEM1AQ9BSK4 669 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 WWP1Q9H0M0 922 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 STK38LQ9Y2H1 464 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 PCDHGC4Q9Y5F7 938 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CCDC162PA2VCL2 907 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 DLX3O60479 287 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 GOT2P00505 430 aaKnown RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 CHRNGP07510 517 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 PRSS56P0CW18 603 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 DNAJB1P25685 340 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 RFTN1Q14699 578 aaPredicted RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 SLC14A2Q15849 920 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 ZNF549Q6P9A3 640 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 FBXO46Q6PJ61 603 aaPredicted RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 CCDC91Q7Z6B0 441 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 LCA5Q86VQ0 697 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 TMC8Q8IU68 726 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 HERC6Q8IVU3 1022 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 MDGA1Q8NFP4 955 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 RDH11Q8TC12 318 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CALML6Q8TD86 181 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 ANKRD49Q8WVL7 239 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 BHMTQ93088 406 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 NSL1Q96IY1 281 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CCDC106Q9BWC9 280 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 TDRD1Q9BXT4 1180 aaKnown RBP6.58□□□□□ -1.36
USP47-201ENST00000305481 MUC3BQ9H195 1237 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 TLE6Q9H808 572 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 XPR1Q9UBH6 696 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 CPQQ9Y646 472 aa6.58□□□□□ -1.36
USP47-201ENST00000305481 EFCAB14O75071 495 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 TMCC1O94876 653 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 APOA4P06727 396 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 BMP1P13497 986 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 GABRR2P28476 465 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PTPN4P29074 926 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PPM1AP35813 382 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 GRIA4P48058 902 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 ZNF140P52738 457 aaPredicted RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 PRAMEP78395 509 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 HTRA4P83105 476 aaPredicted RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 RIPK1Q13546 671 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 HECTD2Q5U5R9 776 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 RINLQ6ZS11 566 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 WDR75Q8IWA0 830 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 FAM217AQ8IXS0 508 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 GPR65Q8IYL9 337 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 LSMEM2Q8N112 164 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CARNMT1Q8N4J0 409 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 TMEM199Q8N511 208 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 MAB21L3Q8N8X9 362 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 KLHL23Q8NBE8 558 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 GPR150Q8NGU9 434 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 MAPK15Q8TD08 544 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms