RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PIK3CGP48736 1102 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 DDX39BQ13838 428 aaKnown RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 GTF2H3Q13889 308 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 CUZD1Q86UP6 607 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 FNDC5Q8NAU1 212 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 PPTC7Q8NI37 304 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 GIPC2Q8TF65 315 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 ZBTB18Q99592 522 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 SEMA3CQ99985 751 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 RTKNQ9BST9 563 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 PKD2L2Q9NZM6 624 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 ZNF510Q9Y2H8 683 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 PDLIM1O00151 329 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 ALBP02768 609 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 MMP3P08254 477 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 SNRPB2P08579 225 aaKnown RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 SERPINH1P50454 418 aaKnown RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 CDC42EP1Q00587 391 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 SOX4Q06945 474 aaPredicted RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 AAGABQ6PD74 315 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 GLB1LQ6UWU2 654 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 HERC6Q8IVU3 1022 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 NAT16Q8N8M0 369 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 LZICQ8WZA0 190 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 TBATAQ96M53 351 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 ADAM2Q99965 735 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 CCDC106Q9BWC9 280 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 PKP3Q9Y446 797 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 H0Y626 953 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 DAB1O75553 588 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 SOAT2O75908 522 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 TRIM16O95361 564 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 PENKP01210 267 aaPredicted RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 MLNP12872 115 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 NRG1Q02297 640 aaPredicted RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 PPP1R8Q12972 351 aaKnown RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 TRIM32Q13049 653 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 ATP1A4Q13733 1029 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 PSMD5Q16401 504 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 CTC1Q2NKJ3 1217 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 RBM20Q5T481 1227 aaKnown RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 STK32CQ86UX6 486 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 DQX1Q8TE96 717 aaKnown RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 PARK7Q99497 189 aaKnown RBP14.13□□□□□ -0.15
SDC2-201ENST00000302190 ORC6Q9Y5N6 252 aa14.13□□□□□ -0.15
SDC2-201ENST00000302190 AP3B1O00203 1094 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 TRAFD1O14545 582 aaPredicted RBP14.12□□□□□ -0.15
SDC2-201ENST00000302190 STX7O15400 261 aaKnown RBP14.12□□□□□ -0.15
SDC2-201ENST00000302190 CLIC3O95833 236 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 CRABP2P29373 138 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 CD52P31358 61 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 DSC2Q02487 901 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 NR6A1Q15406 480 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 PPP1R3AQ16821 1122 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 IL23RQ5VWK5 629 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 PTRHD1Q6GMV3 140 aaKnown RBP14.12□□□□□ -0.15
SDC2-201ENST00000302190 LPCAT1Q8NF37 534 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 NRCAMQ92823 1304 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 ACOX2Q99424 681 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 GID8Q9NWU2 228 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 VTI1BQ9UEU0 232 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 TRAF6Q9Y4K3 522 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 NUP205Q92621 2012 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 DLX3O60479 287 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 RAMP2O60895 175 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 TBX18O95935 607 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 LTA4HP09960 611 aaKnown RBP14.12□□□□□ -0.15
SDC2-201ENST00000302190 SLC1A2P43004 574 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 PKN3Q6P5Z2 889 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 PIWIL4Q7Z3Z4 852 aaKnown RBP14.12□□□□□ -0.15
SDC2-201ENST00000302190 IFNL1Q8IU54 200 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 FBXO39Q8N4B4 442 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 C17orf50Q8WW18 174 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 FIG4Q92562 907 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 NRBF2Q96F24 287 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 PKP2Q99959 881 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 GPR63Q9BZJ6 419 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 COQ10BQ9H8M1 238 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 GLOD4Q9HC38 313 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 MYRFQ9Y2G1 1151 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 PPME1Q9Y570 386 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 SLC30A1Q9Y6M5 507 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 KLF11O14901 512 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 NCK1P16333 377 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 AOC1P19801 751 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 CPT1AP50416 773 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 RENBPP51606 427 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 RAP1GDS1P52306 607 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 TBX4P57082 545 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 PABPC1LQ4VXU2 614 aaKnown RBP14.12□□□□□ -0.15
SDC2-201ENST00000302190 TIGD2Q4W5G0 525 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 CCDC80Q76M96 950 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 CDYL2Q8N8U2 506 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 STK39Q9UEW8 545 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 SNX5Q9Y5X3 404 aa14.12□□□□□ -0.15
SDC2-201ENST00000302190 H2AFYO75367 372 aaKnown RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 PFKMP08237 780 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms