RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 VAT1Q99536 393 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 CNPPD1Q9BV87 410 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 STARD13Q9Y3M8 1113 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 LTA4HP09960 611 aaKnown RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 RFX5P48382 616 aaPredicted RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 MAMLD1Q13495 774 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 VPS26BQ4G0F5 336 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 RALGPS1Q5JS13 557 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 GTPBP3Q969Y2 492 aaKnown RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 EMILIN2Q9BXX0 1053 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 MORF4L1Q9UBU8 362 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 H3BRB1 525 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 OR10H2O60403 315 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 ALADP13716 330 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 PPP1R8Q12972 351 aaKnown RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 CAMK1Q14012 370 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 PTPRNQ16849 979 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 FAM187BQ17R55 369 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 APLFQ8IW19 511 aaPredicted RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 ASB12Q8WXK4 309 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 REPS1Q96D71 796 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 FAM192AQ9GZU8 254 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 RFX7Q2KHR2 1363 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 NT5C1B-RDH14C9J2C7 533 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 C19orf81C9J6K1 198 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 hCG_2039718K7EN88 272 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 NARSO43776 548 aaKnown RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 GRIK4Q16099 956 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF544Q6NX49 715 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 SETD6Q8TBK2 473 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 RNF31Q96EP0 1072 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 CYP2S1Q96SQ9 504 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 FAM126AQ9BYI3 521 aaPredicted RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 CD84Q9UIB8 345 aa12.41□□□□□ -0.42
ABCA3-201ENST00000301732 HBS1LQ9Y450 684 aaKnown RBP12.41□□□□□ -0.42
ABCA3-201ENST00000301732 RGSL1A5PLK6 1076 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 BIRC5O15392 142 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 PRODHO43272 600 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 F9P00740 461 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 ALDH2P05091 517 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 ADRB2P07550 413 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 CTSKP43235 329 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 TNK2Q07912 1038 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 PGM5Q15124 567 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 PCBP2Q15366 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 LRTOMTQ8WZ04 291 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 GAD1Q99259 594 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 FNDC11Q9BVV2 318 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 NMUR2Q9GZQ4 415 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SAR1AQ9NR31 198 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 UBA2Q9UBT2 640 aaPredicted RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 MAP4K5Q9Y4K4 846 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 TCRBV7S2A1N4TA0A589 114 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 DCLK1O15075 740 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SERPINA3P01011 423 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 CCNYL3P0C7X3 344 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SREBF1P36956 1147 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 TAS2R41P59536 307 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 RAET1GQ6H3X3 334 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 ZFPM1Q8IX07 1006 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SLC35C1Q96A29 364 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SP140LQ9H930 580 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SNX15Q9NRS6 342 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 AHSPQ9NZD4 102 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SSR3Q9UNL2 185 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SF3B1O75533 1304 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■■■■■ 136.5
ABCA3-201ENST00000301732 LIASO43766 372 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 MYL9P24844 172 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 RENBPP51606 427 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SLC6A3Q01959 620 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 RGL4Q8IZJ4 473 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 KLHL23Q8NBE8 558 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SNRNP25Q9BV90 132 aaKnown RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 B3GNT5Q9BYG0 378 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 NLNQ9BYT8 704 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 TRIT1Q9H3H1 467 aaKnown RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 CLK4Q9HAZ1 481 aaKnown RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 SPG21Q9NZD8 308 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 RAB23Q9ULC3 237 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 LAMC1P11047 1609 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 BCORL1Q5H9F3 1711 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 NTSR2O95665 410 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 PRKAR1AP10644 381 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 MAD2L1Q13257 205 aaPredicted RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 NAE1Q13564 534 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF549Q6P9A3 640 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 PTPN18Q99952 460 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 EBPLQ9BY08 206 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 DSN1Q9H410 356 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 AMBNQ9NP70 447 aa12.4□□□□□ -0.42
ABCA3-201ENST00000301732 PDP1Q9P0J1 537 aaPredicted RBP12.4□□□□□ -0.42
ABCA3-201ENST00000301732 RFXANKO14593 260 aa12.4□□□□□ -0.43
ABCA3-201ENST00000301732 ENPP3O14638 875 aa12.4□□□□□ -0.43
ABCA3-201ENST00000301732 CD3EAPO15446 510 aaKnown RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms