RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TREX1Q9NSU2 369 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 COMMD3-BMI1R4GMX3 469 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 GREB1Q4ZG55 1949 aa22.09■■□□□ 1.13
TPM4-201ENST00000300933 GOLGA8QA0A0J9YX86 632 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 GOLGA8OA6NCC3 632 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 WASH4PA8MWX3 477 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 GOLGA8NF8WBI6 632 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 TBC1D4O60343 1298 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 ZNF189O75820 626 aaPredicted RBP22.08■■□□□ 1.13
TPM4-201ENST00000300933 NCF2P19878 526 aaPredicted RBP22.08■■□□□ 1.13
TPM4-201ENST00000300933 HTR7P34969 479 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 IDH3AP50213 366 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 NDST2P52849 883 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 AQP4P55087 323 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 NEPROQ6NW34 567 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 SPATA24Q86W54 205 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 MAPK15Q8TD08 544 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 SH3RF2Q8TEC5 729 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 NAT14Q8WUY8 206 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 SMIM14Q96QK8 99 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 VN1R3Q9BXE9 311 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 PREBQ9HCU5 417 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 FBXO5Q9UKT4 447 aa22.08■■□□□ 1.13
TPM4-201ENST00000300933 hCG_2014768A0A024R1R8 64 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 PGM3O95394 542 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 IRF1P10914 325 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 NAGLUP54802 743 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 NRG1Q02297 640 aaPredicted RBP22.08■■□□□ 1.12
TPM4-201ENST00000300933 GALNT3Q14435 633 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 DNAL1Q4LDG9 190 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 RNF111Q6ZNA4 994 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 ACAD11Q709F0 780 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 PDSS2Q86YH6 399 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 DENND1CQ8IV53 801 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 ELAC1Q9H777 363 aaKnown RBP22.08■■□□□ 1.12
TPM4-201ENST00000300933 SLC4A7Q9Y6M7 1214 aa22.08■■□□□ 1.12
TPM4-201ENST00000300933 NEMP2A6NFY4 417 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 PDE5AO76074 875 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 TACR2P21452 398 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 ALDH7A1P49419 539 aaKnown RBP22.07■■□□□ 1.12
TPM4-201ENST00000300933 SERPINH1P50454 418 aaKnown RBP22.07■■□□□ 1.12
TPM4-201ENST00000300933 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.07■■□□□ 1.12
TPM4-201ENST00000300933 RALGPS1Q5JS13 557 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 CRIPAKQ8N1N5 446 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 CCDC106Q9BWC9 280 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 HIPK3Q9H422 1215 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 S100A14Q9HCY8 104 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 ATXN10Q9UBB4 475 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 MIA3Q5JRA6 1907 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 IGLV3-10A0A075B6K4 115 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 A0A088AWK7 358 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 TSPAN3O60637 253 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 SEC24AO95486 1093 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 MPSTP25325 297 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 FRG1Q14331 258 aaKnown RBP22.07■■□□□ 1.12
TPM4-201ENST00000300933 SIRPB2Q5JXA9 342 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 RPS27LQ71UM5 84 aaKnown RBP22.07■■□□□ 1.12
TPM4-201ENST00000300933 DHDDSQ86SQ9 333 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 EFCAB3Q8N7B9 438 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 HIC2Q96JB3 615 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 COG4Q9H9E3 785 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 ADAMTS6Q9UKP5 1117 aa22.07■■□□□ 1.12
TPM4-201ENST00000300933 APOBEC2Q9Y235 224 aaKnown RBP22.07■■□□□ 1.12
TPM4-201ENST00000300933 LOC100653049A0A140TA62 436 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 NEMP1O14524 444 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 ZMPSTE24O75844 475 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 KRT34O76011 436 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 GRK2P25098 689 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 PEX2P28328 305 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 SGSHP51688 502 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 INHBCP55103 352 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 PABPC1LQ4VXU2 614 aaKnown RBP22.06■■□□□ 1.12
TPM4-201ENST00000300933 SLC9B1Q4ZJI4 515 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 FAM91A1Q658Y4 838 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 OR13J1Q8NGT2 312 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 ARRDC2Q8TBH0 407 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 BLOC1S5Q8TDH9 187 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 HDAC10Q969S8 669 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 WBP2Q969T9 261 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 XPR1Q9UBH6 696 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 E9PBE3 544 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 AP3B1O00203 1094 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 ZNF195O14628 629 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 KLHL41O60662 606 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 TRIM13O60858 407 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 SCNN1BP51168 640 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 SERINC3Q13530 473 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 TMCO4Q5TGY1 634 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 KIAA1841Q6NSI8 718 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 ANKS3Q6ZW76 656 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 AUTS2Q8WXX7 1259 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 DNAJC1Q96KC8 554 aaKnown RBP22.06■■□□□ 1.12
TPM4-201ENST00000300933 WDR55Q9H6Y2 383 aaPredicted RBP22.06■■□□□ 1.12
TPM4-201ENST00000300933 CYP4F11Q9HBI6 524 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 ACOT9Q9Y305 439 aa22.06■■□□□ 1.12
TPM4-201ENST00000300933 ZFP37Q9Y6Q3 630 aaPredicted RBP22.06■■□□□ 1.12
TPM4-201ENST00000300933 SLC4A1P02730 911 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 STMN1P16949 149 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 GRIA4P48058 902 aa22.05■■□□□ 1.12
TPM4-201ENST00000300933 MSLNQ13421 630 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms