RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ORC1Q13415 861 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 INO80DQ53TQ3 878 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 ARMC12Q5T9G4 340 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 PIK3R6Q5UE93 754 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 FAM126AQ9BYI3 521 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 SNX7Q9UNH6 387 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 SORCS3Q9UPU3 1222 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ISM1B1AKI9 464 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 FGF10O15520 208 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 MTHFD1P11586 935 aaKnown RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 IZUMO2Q6UXV1 221 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 FRRS1Q6ZNA5 592 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 FBXO16Q8IX29 292 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 C12orf56Q8IXR9 622 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MCOLN2Q8IZK6 566 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MINDY2Q8NBR6 621 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ING5Q8WYH8 240 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 FDXACB1Q9BRP7 624 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 SPATC1LQ9H0A9 340 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ABHD16BQ9H3Z7 469 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MID1IP1Q9NPA3 183 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 PCDH12Q9NPG4 1184 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 SLC27A6Q9Y2P4 619 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 OR1I1O60431 355 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ETS1P14921 441 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 BGNP21810 368 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 FGFR3P22607 806 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 SCNN1AP37088 669 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 N4BP2L1Q5TBK1 243 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 REXO1L1PQ8IX06 675 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 C11orf65Q8NCR3 313 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 Q96MT0 163 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 TRAPPC9Q96Q05 1148 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 SLC6A15Q9H2J7 730 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 GPN1Q9HCN4 374 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 SAR1AQ9NR31 198 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MYH8P13535 1937 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 PLGLB1Q02325 96 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ACSM2AQ08AH3 577 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 NR1D2Q14995 579 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MAPK14Q16539 360 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 TCHHL1Q5QJ38 904 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 ACSM2BQ68CK6 577 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ALG1LQ6GMV1 187 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 FOXR2Q6PJQ5 311 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 RTL4Q6ZR62 310 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ZFP28Q8NHY6 868 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 COQ8AQ8NI60 647 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 NAT14Q8WUY8 206 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ZNF606Q8WXB4 792 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 HGH1Q9BTY7 390 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 C2orf49Q9BVC5 232 aaPredicted RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 FAIM2Q9BWQ8 316 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 POLR1EQ9GZS1 481 aaKnown RBP12.12□□□□□ -0.47
PCF11-201ENST00000298281 L7N2F9 121 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 NUAK1O60285 661 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ARP10275 920 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MAGEA12P43365 314 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 VAMP2P63027 116 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 ERVK-24P63145 666 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 CDKL4Q5MAI5 379 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 WDR59Q6PJI9 974 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 CCDC80Q76M96 950 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 LRRC46Q96FV0 321 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 IKZF2Q9UKS7 526 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 CORO2BQ9UQ03 480 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 NAALADL1Q9UQQ1 740 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MYRFQ9Y2G1 1151 aa12.12□□□□□ -0.47
PCF11-201ENST00000298281 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
PCF11-201ENST00000298281 CTDNEP1O95476 244 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 DPEP1P16444 411 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 SMIM11AP58511 58 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 PCBP1Q15365 356 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCF11-201ENST00000298281 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 PAGE2Q7Z2X7 111 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 ITFG1Q8TB96 612 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 MYOCQ99972 504 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 IL22Q9GZX6 179 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 ARL15Q9NXU5 204 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 NEK3P51956 506 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 TOP3AQ13472 1001 aaPredicted RBP12.11□□□□□ -0.47
PCF11-201ENST00000298281 GRIK4Q16099 956 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.11□□□□□ -0.47
PCF11-201ENST00000298281 SSX6Q7RTT6 188 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 GPSM1Q86YR5 675 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 UBR7Q8N806 425 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 AP3S1Q92572 193 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 ZKSCAN4Q969J2 545 aaPredicted RBP12.11□□□□□ -0.47
PCF11-201ENST00000298281 NUDT5Q9UKK9 219 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 DNPEPQ9ULA0 475 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 CARD8Q9Y2G2 431 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
PCF11-201ENST00000298281 A0A087WXM4 84 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 IFNGP01579 166 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 TGFB2P61812 414 aa12.11□□□□□ -0.47
PCF11-201ENST00000298281 CREMQ03060 361 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms