RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 BRSK1Q8TDC3 778 aa14.35□□□□□ -0.11
C9orf3-202ENST00000297979 PEX13Q92968 403 aa14.35□□□□□ -0.11
C9orf3-202ENST00000297979 FBXO5Q9UKT4 447 aa14.35□□□□□ -0.11
C9orf3-202ENST00000297979 EMCNQ9ULC0 261 aa14.35□□□□□ -0.11
C9orf3-202ENST00000297979 SLC39A10Q9ULF5 831 aa14.35□□□□□ -0.11
C9orf3-202ENST00000297979 ARL2BPQ9Y2Y0 163 aa14.35□□□□□ -0.11
C9orf3-202ENST00000297979 GBF1Q92538 1859 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 A0A096LPK6 155 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 KLF11O14901 512 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 BIRC5O15392 142 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 SLC7A4O43246 635 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 PRKCGP05129 697 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 GSTA1P08263 222 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 NSUN2Q08J23 767 aaKnown RBP eCLIP14.34□□□□□ -0.11
C9orf3-202ENST00000297979 RNF43Q68DV7 783 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 RETSATQ6NUM9 610 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 OTOAQ7RTW8 1153 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 C11orf96Q7Z7L8 435 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 APCDD1Q8J025 514 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 SAMD11Q96NU1 681 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 MECRQ9BV79 373 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 KIAA1522Q9P206 1035 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-202ENST00000297979 SOBPA7XYQ1 873 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 PLIN3O60664 434 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 BPGMP07738 259 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 POLD2P49005 469 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 RHOAP61586 193 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 PRAMEP78395 509 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 ACVR1Q04771 509 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 LMAN2Q12907 356 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 DBN1Q16643 649 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 C16orf46Q6P387 395 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-202ENST00000297979 ACVR1CQ8NER5 493 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 FIBINQ8TAL6 211 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 USP13Q92995 863 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-202ENST00000297979 RMDN1Q96DB5 314 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 TSSK1BQ9BXA7 367 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 MFSD1Q9H3U5 465 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 ZDHHC7Q9NXF8 308 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 SIRPGQ9P1W8 387 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 DPP7Q9UHL4 492 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 FCF1Q9Y324 198 aaKnown RBP14.34□□□□□ -0.11
C9orf3-202ENST00000297979 RAI2Q9Y5P3 530 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 ARL5AQ9Y689 179 aa14.34□□□□□ -0.11
C9orf3-202ENST00000297979 PER2O15055 1255 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.11
C9orf3-202ENST00000297979 DLG2Q15700 870 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 PRSS36Q5K4E3 855 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 RNF187Q5TA31 235 aaPredicted RBP14.33□□□□□ -0.11
C9orf3-202ENST00000297979 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 SRLQ86TD4 932 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 NUDCD3Q8IVD9 361 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 ACDQ96AP0 544 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 TDP1Q9NUW8 608 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 RIMKLBQ9ULI2 386 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 CLEC4EQ9ULY5 219 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 RRP15Q9Y3B9 282 aaKnown RBP14.33□□□□□ -0.11
C9orf3-202ENST00000297979 KCTD3Q9Y597 815 aa14.33□□□□□ -0.11
C9orf3-202ENST00000297979 PRLP01236 227 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 C2P06681 752 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 PIRTP0C851 137 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 CSRP3P50461 194 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 ARSDP51689 593 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 IRX4P78413 519 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 NTHL1P78549 312 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 GPM6BQ13491 265 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 RALGPS1Q5JS13 557 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 CCDC121Q6ZUS5 278 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 CLEC14AQ86T13 490 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 LMNTD2Q8IXW0 634 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 OR6P1Q8NGX9 317 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 RIN3Q8TB24 985 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 RAB3IL1Q8TBN0 382 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 HDAC10Q969S8 669 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 PCDHGC4Q9Y5F7 938 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 NOTCH4Q99466 2003 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 FAM95CA0A1B0GW59 222 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 PROCP04070 461 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 CCDC153Q494R4 210 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 ZNF697Q5TEC3 545 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 ATG16L1Q676U5 607 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 GRASPQ7Z6J2 395 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-202ENST00000297979 LPCAT1Q8NF37 534 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 STYXQ8WUJ0 223 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 E2F7Q96AV8 911 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 DNAJC1Q96KC8 554 aaKnown RBP14.33□□□□□ -0.12
C9orf3-202ENST00000297979 ADGRE3Q9BY15 652 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 TMEM216Q9P0N5 145 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 KLHL14Q9P2G3 628 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 ANKRD6Q9Y2G4 727 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 HCFC2Q9Y5Z7 792 aa14.33□□□□□ -0.12
C9orf3-202ENST00000297979 ANKRD36A6QL64 1941 aa14.32□□□□□ -0.12
C9orf3-202ENST00000297979 CCT8L1PA6NM43 557 aa14.32□□□□□ -0.12
C9orf3-202ENST00000297979 CCL22O00626 93 aa14.32□□□□□ -0.12
C9orf3-202ENST00000297979 CRTAMO95727 393 aa14.32□□□□□ -0.12
C9orf3-202ENST00000297979 MT-CO1P00395 513 aa14.32□□□□□ -0.12
C9orf3-202ENST00000297979 IL1BP01584 269 aa14.32□□□□□ -0.12
C9orf3-202ENST00000297979 POU2F2P09086 479 aa14.32□□□□□ -0.12
C9orf3-202ENST00000297979 SAT1P21673 171 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms