RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FOXN2P32314 431 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 ACVR1Q04771 509 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 RGS9BPQ6ZS82 235 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 CDHR3Q6ZTQ4 885 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 METTL3Q86U44 580 aaKnown RBP15.65■□□□□ 0.1
LSM6-201ENST00000296581 PARP9Q8IXQ6 854 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 ZNF513Q8N8E2 541 aaPredicted RBP15.65■□□□□ 0.1
LSM6-201ENST00000296581 BRSK1Q8TDC3 778 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 SPDL1Q96EA4 605 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 FAM167BQ9BTA0 163 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 LINC00597Q9H2U6 94 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 SPHK2Q9NRA0 654 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 MARK1Q9P0L2 795 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 GGT7Q9UJ14 662 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 RAI2Q9Y5P3 530 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 CEP290O15078 2479 aa15.65■□□□□ 0.1
LSM6-201ENST00000296581 TPP1O14773 563 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 HLA-FP30511 346 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 CRHR1P34998 444 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 PEX19P40855 299 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 CBX2Q14781 532 aaPredicted RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 PDK4Q16654 411 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 UGP2Q16851 508 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 PITRM1Q5JRX3 1037 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 FSTL4Q6MZW2 842 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 TMC5Q6UXY8 1006 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 NDUFAF2Q8N183 169 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 ZNF557Q8N988 423 aaPredicted RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 PAIP2Q9BPZ3 127 aaKnown RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 C12orf65Q9H3J6 166 aaKnown RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 PCMTD2Q9NV79 361 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 DZANK1Q9NVP4 752 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.64■□□□□ 0.09
LSM6-201ENST00000296581 PLLPQ9Y342 182 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 TCP11X1B4DZS4 312 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 K7ERQ8 282 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 SLC9A3R1O14745 358 aaPredicted RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 SLC7A4O43246 635 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 TAC1P20366 129 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 CSNK1DP48730 415 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 AP1S1P61966 158 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 PDE1BQ01064 536 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 TRAF2Q12933 501 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 SEPT7Q16181 437 aaKnown RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 ZC3HC1Q86WB0 502 aaKnown RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 DCLK2Q8N568 766 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 CELF5Q8N6W0 485 aaKnown RBP15.64■□□□□ 0.09
LSM6-201ENST00000296581 BBS2Q9BXC9 721 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 RHOJQ9H4E5 214 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 SLC28A3Q9HAS3 691 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 PCDHGC4Q9Y5F7 938 aa15.64■□□□□ 0.09
LSM6-201ENST00000296581 NEDD8-MDP1E9PL57 170 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 SMAD6O43541 496 aaKnown RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 VIMP08670 466 aaKnown RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 GABRB3P28472 473 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 HADHAP40939 763 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 SERPINB8P50452 374 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 THOC5Q13769 683 aaKnown RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 PDCD2Q16342 344 aaPredicted RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 QPCTQ16769 361 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 ASTLQ6HA08 431 aaPredicted RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 NEPROQ6NW34 567 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 KIAA0408Q6ZU52 694 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 CPLX4Q7Z7G2 160 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 ADGRG2Q8IZP9 1017 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 C2CD4AQ8NCU7 369 aaPredicted RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 BLOC1S5Q8TDH9 187 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 PTPRN2Q92932 1015 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 VPS39Q96JC1 886 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 FAM111AQ96PZ2 611 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 GPR22Q99680 433 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 IQCGQ9H095 443 aaKnown RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 VPS11Q9H270 941 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 MTO1Q9Y2Z2 717 aaKnown RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 WNT6Q9Y6F9 365 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 FZD6O60353 706 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 PRKCGP05129 697 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 PDHA1P08559 390 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 F7P08709 466 aaPredicted RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 SLC1A2P43004 574 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 PDE1CQ14123 709 aaPredicted RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 FUT11Q495W5 492 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 LY6G5CQ5SRR4 150 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 ATXN7L2Q5T6C5 722 aaPredicted RBP15.63■□□□□ 0.09
LSM6-201ENST00000296581 CYB5D1Q6P9G0 228 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 DENND6AQ8IWF6 608 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 CALML6Q8TD86 181 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 ADGRE3Q9BY15 652 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 SLC13A1Q9BZW2 595 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 MFSD1Q9H3U5 465 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 BATF3Q9NR55 127 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 SNX15Q9NRS6 342 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 KCTD3Q9Y597 815 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 SPO11Q9Y5K1 396 aa15.63■□□□□ 0.09
LSM6-201ENST00000296581 COQ9O75208 318 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 AHSGP02765 367 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 TYRP14679 529 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 PSMA3P25788 255 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 CSRP3P50461 194 aa15.62■□□□□ 0.09
LSM6-201ENST00000296581 ARSDP51689 593 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms