RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 CCT7Q99832 543 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 DPEP3Q9H4B8 488 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 RETREG1Q9H6L5 497 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 IGSF5Q9NSI5 407 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 FAM49BQ9NUQ9 324 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TBC1D13Q9NVG8 400 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TUBGCP4Q9UGJ1 667 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 RUVBL2Q9Y230 463 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 SMIM28A0A1B0GU29 152 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 SH3PXD2BA1X283 911 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TTC24A2A3L6 582 aaPredicted RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 MOXD2PA6NHM9 499 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 HUS1O60921 280 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 DNAJB5O75953 348 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 IPO13O94829 963 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 PGK1P00558 417 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 LCP1P13796 627 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 JUNBP17275 347 aaPredicted RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 PTPN1P18031 435 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 IMPDH1P20839 514 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CD9P21926 228 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 EPHA3P29320 983 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CD151P48509 253 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 NAGLUP54802 743 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 NME5P56597 212 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 ADAM17P78536 824 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 ACVR1Q04771 509 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 ADIGQ0VDE8 80 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 SFSWAPQ12872 951 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 USP10Q14694 798 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 GRIK4Q16099 956 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 FAM83EQ2M2I3 478 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 DCAF6Q58WW2 860 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 REP15Q6BDI9 236 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 OGFOD2Q6N063 350 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 RANBP10Q6VN20 620 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CAMK1DQ8IU85 385 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CCNYQ8ND76 341 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 GPR150Q8NGU9 434 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 OR2T34Q8NGX1 318 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 OR2T3Q8NH03 318 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 RHEBL1Q8TAI7 183 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 FNDC8Q8TC99 324 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 RSPH1Q8WYR4 309 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TCF12Q99081 682 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 TBL1YQ9BQ87 522 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 C1QTNF3Q9BXJ4 246 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 COPS7BQ9H9Q2 264 aaPredicted RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 PLGRKTQ9HBL7 147 aa6.21□□□□□ -1.42
VCAM1-201ENST00000294728 IARS2Q9NSE4 1012 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 CHCHD3Q9NX63 227 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 DUS2Q9NX74 493 aaKnown RBP6.21□□□□□ -1.42
VCAM1-201ENST00000294728 DOCK4Q8N1I0 1966 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 SHROOM3Q8TF72 1996 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 TMEM265A0A087WTH1 108 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 FAM95CA0A1B0GW59 222 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 ARHGEF37A1IGU5 675 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 C7orf72A4D263 438 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 HHLA1C9JL84 531 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 H0YAE9 185 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 H3BRB1 525 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 TK2O00142 265 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 PSMD12O00232 456 aaPredicted RBP6.2□□□□□ -1.42
VCAM1-201ENST00000294728 FBP2O00757 339 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 MATN3O15232 486 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 NRP2O60462 931 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 OR6B1O95007 311 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 FAM200BP0CF97 657 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 SYN1P17600 705 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 NFKB1P19838 968 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 ARNTP27540 789 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 DCKP27707 260 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 NMBRP28336 390 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 HOXC8P31273 242 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 SNX17Q15036 470 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 PPM1LQ5SGD2 360 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 Q6ZNX1 250 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 FBXO16Q8IX29 292 aaPredicted RBP6.2□□□□□ -1.42
VCAM1-201ENST00000294728 SIX6OS1Q8N1H7 587 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 DNAAF3Q8N9W5 541 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 PDPRQ8NCN5 879 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 TRIB2Q92519 343 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 EME1Q96AY2 570 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 RMND5BQ96G75 393 aaPredicted RBP6.2□□□□□ -1.42
VCAM1-201ENST00000294728 RDH12Q96NR8 316 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 C9orf16Q9BUW7 83 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 COLEC11Q9BWP8 271 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 TDRD1Q9BXT4 1180 aaKnown RBP6.2□□□□□ -1.42
VCAM1-201ENST00000294728 UPF3AQ9H1J1 476 aaKnown RBP6.2□□□□□ -1.42
VCAM1-201ENST00000294728 TUT1Q9H6E5 874 aaKnown RBP6.2□□□□□ -1.42
VCAM1-201ENST00000294728 WDR55Q9H6Y2 383 aaPredicted RBP6.2□□□□□ -1.42
VCAM1-201ENST00000294728 MAN1C1Q9NR34 630 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 AGPAT4Q9NRZ5 378 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 SLC38A7Q9NVC3 462 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 ACTR3BQ9P1U1 418 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 XPR1Q9UBH6 696 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 CROTQ9UKG9 612 aa6.2□□□□□ -1.42
VCAM1-201ENST00000294728 B3GNT3Q9Y2A9 372 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms