RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CLCN5P51795 746 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 OXCT1P55809 520 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 IKBKEQ14164 716 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 FAM83EQ2M2I3 478 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 HECTD2Q5U5R9 776 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 TLDC1Q6P9B6 456 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 BBS5Q8N3I7 341 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 PHTF2Q8N3S3 785 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 TTC16Q8NEE8 873 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 ZNF461Q8TAF7 563 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 RSRC1Q96IZ7 334 aaKnown RBP14.08□□□□□ -0.16
NXF1-201ENST00000294172 FEM1CQ96JP0 617 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 DNAJC1Q96KC8 554 aaKnown RBP14.08□□□□□ -0.16
NXF1-201ENST00000294172 CINPQ9BW66 212 aaPredicted RBP14.08□□□□□ -0.16
NXF1-201ENST00000294172 RNF38Q9H0F5 515 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 MMADHCQ9H3L0 296 aaPredicted RBP14.08□□□□□ -0.16
NXF1-201ENST00000294172 MFSD1Q9H3U5 465 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 IGSF5Q9NSI5 407 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 SMPD4Q9NXE4 827 aa14.08□□□□□ -0.16
NXF1-201ENST00000294172 UBA2Q9UBT2 640 aaPredicted RBP14.08□□□□□ -0.16
NXF1-201ENST00000294172 C2orf78A6NCI8 922 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 H3BNC9 293 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 CBX4O00257 560 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 STC2O76061 302 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 FGF1P05230 155 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 CCDC166P0CW27 439 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 MYL4P12829 197 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 HLA-DPA1P20036 260 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 DNAJB1P25685 340 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 PRKAA2P54646 552 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 SLC25A3Q00325 362 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 C5orf22Q49AR2 442 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 DNAL1Q4LDG9 190 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 ACSBG2Q5FVE4 666 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 SEL1L3Q68CR1 1132 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 OR13C4Q8NGS5 318 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 NUF2Q9BZD4 464 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 CYP4F12Q9HCS2 524 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 TCF7L2Q9NQB0 619 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 SEPT3Q9UH03 358 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 ZDHHC2Q9UIJ5 367 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 G3BP2Q9UN86 482 aaKnown RBP14.07□□□□□ -0.16
NXF1-201ENST00000294172 VWA7Q9Y334 891 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.07□□□□□ -0.16
NXF1-201ENST00000294172 MATN2O00339 956 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 EFEMP2O95967 443 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 S1PR4O95977 384 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 GOT2P00505 430 aaKnown RBP14.07□□□□□ -0.16
NXF1-201ENST00000294172 SLC4A1P02730 911 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 RHOCP08134 193 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 CCL5P13501 91 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 TFEBP19484 476 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 EPHA3P29320 983 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 RGRP47804 291 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 ERFP50548 548 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 KPNA2P52292 529 aaKnown RBP14.07□□□□□ -0.16
NXF1-201ENST00000294172 COPAP53621 1224 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 PRKAA1Q13131 559 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 ZNF177Q13360 481 aaPredicted RBP14.07□□□□□ -0.16
NXF1-201ENST00000294172 ARMC3Q5W041 872 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 SLC39A5Q6ZMH5 540 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 SCUBE1Q8IWY4 988 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 TXNDC5Q8NBS9 432 aaKnown RBP14.07□□□□□ -0.16
NXF1-201ENST00000294172 OVCA2Q8WZ82 227 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 TSPAN17Q96FV3 270 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 ZNF599Q96NL3 588 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 POMKQ9H5K3 350 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 CXorf56Q9H5V9 222 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 OGDHLQ9ULD0 1010 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 PLA2G4CQ9UP65 541 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 YIPF1Q9Y548 306 aa14.07□□□□□ -0.16
NXF1-201ENST00000294172 HDAC3O15379 428 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 CLDN11O75508 207 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 GLP2RO95838 553 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 CDKN2DP55273 166 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 SESN3P58005 492 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 FSCBQ5H9T9 825 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 AGAP9Q5VTM2 703 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 KLHDC10Q6PID8 442 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 ANKRD33Q7Z3H0 272 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 ULK2Q8IYT8 1036 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 LSMEM2Q8N112 164 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 ANKRD49Q8WVL7 239 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 STMN2Q93045 179 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 WBP2Q969T9 261 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 PLD4Q96BZ4 506 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 RMDN1Q96DB5 314 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 TMEM169Q96HH4 297 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 OSBPL1AQ9BXW6 950 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 DCLRE1BQ9H816 532 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 AGO1Q9UL18 857 aaKnown RBP14.06□□□□□ -0.16
NXF1-201ENST00000294172 CCDC162PA2VCL2 907 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 PRRG1O14668 218 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 CD3EAPO15446 510 aaKnown RBP14.06□□□□□ -0.16
NXF1-201ENST00000294172 KDELR3O43731 214 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 ZBTB14O43829 449 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 ZMPSTE24O75844 475 aa14.06□□□□□ -0.16
NXF1-201ENST00000294172 KRT36O76013 467 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms