RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 Q8N9G6 341 aaPredicted RBP12.14□□□□□ -0.47
CLPB-201ENST00000294053 RP9Q8TA86 221 aaKnown RBP12.14□□□□□ -0.47
CLPB-201ENST00000294053 MAGEE2Q8TD90 523 aaPredicted RBP12.14□□□□□ -0.47
CLPB-201ENST00000294053 HTR3CQ8WXA8 447 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 GAD1Q99259 594 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 PARK7Q99497 189 aaKnown RBP12.14□□□□□ -0.47
CLPB-201ENST00000294053 DGCR6LQ9BY27 220 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 DERAQ9Y315 318 aa12.14□□□□□ -0.47
CLPB-201ENST00000294053 MYBPHLA2RUH7 354 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 YJEFN3A6XGL0 299 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 ZNF195O14628 629 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 HDAC3O15379 428 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 CNOT3O75175 753 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 BCAS2O75934 225 aaPredicted RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 FYNP06241 537 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 ATP5BP06576 529 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 CLCNKBP51801 687 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 TPD52P55327 224 aaPredicted RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 RAB39AQ14964 217 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 TBCELQ5QJ74 424 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 THOC7Q6I9Y2 204 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 TBC1D15Q8TC07 691 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 CAPSLQ8WWF8 208 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 EDEM1Q92611 657 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 P2RY11Q96G91 374 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 BIRC8Q96P09 236 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 MED10Q9BTT4 135 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 CCDC90BQ9GZT6 254 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 RPF2Q9H7B2 306 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 NMRAL1Q9HBL8 299 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 CRTAC1Q9NQ79 661 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 FZD10Q9ULW2 581 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 PRSS51A0A1B0GVH4 220 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 CASTOR2A6NHX0 329 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 CAPN15O75808 1086 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 ESRRBO95718 433 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 JAK1P23458 1154 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 RPL14P50914 215 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 CLCN2P51788 898 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 PLK1P53350 603 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 RAD23AP54725 363 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 RPL26P61254 145 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 GEN1Q17RS7 908 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 BTLAQ7Z6A9 289 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 TTC39CQ8N584 583 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 COLGALT1Q8NBJ5 622 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 SLC7A14Q8TBB6 771 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 QKIQ96PU8 341 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLPB-201ENST00000294053 UPF3AQ9H1J1 476 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 STN1Q9H668 368 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 SMOXQ9NWM0 555 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 FAM32AQ9Y421 112 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 F8W810 466 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 RNF103O00237 685 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 PRDX6P30041 224 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 MAGEA3P43357 314 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 ALDH3B2P48448 385 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 TKTL1P51854 596 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 PIWIL3Q7Z3Z3 882 aaKnown RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 CDKL3Q8IVW4 592 aaPredicted RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 ACVR1CQ8NER5 493 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 OR9I1Q8NGQ6 314 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
CLPB-201ENST00000294053 ULBP1Q9BZM6 244 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 VPS45Q9NRW7 570 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 SYBUQ9NX95 663 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 GDAP2Q9NXN4 497 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 UBP1Q9NZI7 540 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 ZNF229Q9UJW7 825 aa12.13□□□□□ -0.47
CLPB-201ENST00000294053 TRIM38O00635 465 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 GCATO75600 419 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 USP17L7P0C7H9 530 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 NPR3P17342 541 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 TCEA1P23193 301 aaKnown RBP12.12□□□□□ -0.47
CLPB-201ENST00000294053 PRKCQQ04759 706 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 TRIM25Q14258 630 aaKnown RBP12.12□□□□□ -0.47
CLPB-201ENST00000294053 ZNF460Q14592 562 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 SLC25A52Q3SY17 297 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 LYSMD3Q7Z3D4 306 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 SPPL2CQ8IUH8 684 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 MCUQ8NE86 351 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 DUSP16Q9BY84 665 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 POU2F3Q9UKI9 436 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 SLC27A5Q9Y2P5 690 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 COPG1Q9Y678 874 aaKnown RBP12.12□□□□□ -0.47
CLPB-201ENST00000294053 SQORQ9Y6N5 450 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 HEATR9A2RTY3 570 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 KRBA1A5PL33 1030 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 CD4P01730 458 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 C2P06681 752 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 ZNF12P17014 697 aa12.12□□□□□ -0.47
CLPB-201ENST00000294053 ALDH4A1P30038 563 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms