RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RTP1P59025 263 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 SLAIN1Q8ND83 568 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 JOSD2Q8TAC2 188 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 FANCEQ9HB96 536 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 COQ6Q9Y2Z9 468 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 ZNF780BQ9Y6R6 833 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 SEPT4O43236 478 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 PCCBP05166 539 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 HGFP14210 728 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 TMED10P49755 219 aaKnown RBP17.37■□□□□ 0.37
SHANK1-201ENST00000293441 KRR1Q13601 381 aaKnown RBP17.37■□□□□ 0.37
SHANK1-201ENST00000293441 RNASE11Q8TAA1 199 aaKnown RBP17.37■□□□□ 0.37
SHANK1-201ENST00000293441 IKZF4Q9H2S9 585 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 CYLDQ9NQC7 956 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 KCNK4Q9NYG8 393 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 VPS4AQ9UN37 437 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 TPRKBQ9Y3C4 175 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 MPPE1Q53F39 396 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 ZNF549Q6P9A3 640 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 RBFAQ8N0V3 343 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 DNAJB14Q8TBM8 379 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 ING5Q8WYH8 240 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 MBOAT7Q96N66 472 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 MAT2BQ9NZL9 334 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 ANAPC2Q9UJX6 822 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 MROH1Q8NDA8 1641 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 SMIM28A0A1B0GU29 152 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 FAM237BA0A1B0GVD1 139 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 KRT75O95678 551 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 RAB14P61106 215 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 SQLEQ14534 574 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 FAAH2Q6GMR7 532 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 PPP3R2Q96LZ3 170 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 PWWP2AQ96N64 755 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 MRPL57Q9BQC6 102 aaKnown RBP17.37■□□□□ 0.37
SHANK1-201ENST00000293441 PCYOX1Q9UHG3 505 aa17.37■□□□□ 0.37
SHANK1-201ENST00000293441 CLCNKBP51801 687 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 MRPS22P82650 360 aaKnown RBP17.36■□□□□ 0.37
SHANK1-201ENST00000293441 CPSF6Q16630 551 aaKnown RBP eCLIP17.36■□□□□ 0.37
SHANK1-201ENST00000293441 MAPKAPK3Q16644 382 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 ARSHQ5FYA8 562 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 WASHC2DQ5SRD0 308 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 TRIQKQ629K1 86 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 EIF3MQ7L2H7 374 aaKnown RBP17.36■□□□□ 0.37
SHANK1-201ENST00000293441 LPCAT2Q7L5N7 544 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 OR52L1Q8NGH7 329 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 CLIC5Q9NZA1 410 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 TMEM191CA6NGB0 347 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 ZMPSTE24O75844 475 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 COPS8Q99627 209 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 GCATO75600 419 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 FGF1P05230 155 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 CES1P23141 567 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 SEC13P55735 322 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 ZNF57Q68EA5 555 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-201ENST00000293441 ZFP1Q6P2D0 407 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 HDDC2Q7Z4H3 204 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 ADHFE1Q8IWW8 467 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 C19orf60Q96EN9 201 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 TTLL2Q9BWV7 592 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 OTCP00480 354 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 C1RP00736 705 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 LRRC74BQ6ZQY2 392 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 CHST9Q7L1S5 443 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 ADAMTSL2Q86TH1 951 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 FBXO22Q8NEZ5 403 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 RORBQ92753 470 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 MIEF2Q96C03 454 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 BTN2A3PQ96KV6 586 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 TEKT5Q96M29 485 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 ANGPT4Q9Y264 503 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 WNT3AP56704 352 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 SMARCB1Q12824 385 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 RSBN1Q5VWQ0 802 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-201ENST00000293441 DEC1Q9P2X7 70 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 MAPRE3Q9UPY8 281 aa17.36■□□□□ 0.37
SHANK1-201ENST00000293441 TGFB1I1O43294 461 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 ST13P50502 369 aaKnown RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 MAPK10P53779 464 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 SLC34A1Q06495 639 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 TSHZ1Q6ZSZ6 1077 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 UBE2R2Q712K3 238 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 EBNA1BP2Q99848 306 aaKnown RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 C1orf50Q9BV19 199 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 AP3M1Q9Y2T2 418 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 SNRPB2P08579 225 aaKnown RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 RPL4P36578 427 aaKnown RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 SLC5A3P53794 718 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 SRSF11Q05519 484 aaKnown RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 PPP1R15BQ5SWA1 713 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 PHYKPLQ8IUZ5 450 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 IZUMO1Q8IYV9 350 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 RMND5BQ96G75 393 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 ITGA2BP08514 1039 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 R3HCC1LQ7Z5L2 792 aaKnown RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 DHRSXQ8N5I4 330 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 OLFM1Q99784 485 aa17.35■□□□□ 0.37
SHANK1-201ENST00000293441 PPP1R11O60927 126 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-201ENST00000293441 RECQL5O94762 991 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms