RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 STAMBPO95630 424 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 CHRNA4P43681 627 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 C6orf10Q5SRN2 563 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 FAM45BPQ6NSW5 357 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 HMBOX1Q6NT76 420 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 SPNS2Q8IVW8 549 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 FAM45AQ8TCE6 357 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 PPP1R10Q96QC0 940 aaKnown RBP19.3■□□□□ 0.68
LSM12-201ENST00000293406 MATN3O15232 486 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 MAFKO60675 156 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 LTA4HP09960 611 aaKnown RBP19.3■□□□□ 0.68
LSM12-201ENST00000293406 CCDC166P0CW27 439 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 ZBTB49Q6ZSB9 765 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 KIAA0408Q6ZU52 694 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 DHFR2Q86XF0 187 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 IRGQQ8WZA9 623 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 RMND5BQ96G75 393 aaPredicted RBP19.3■□□□□ 0.68
LSM12-201ENST00000293406 SMARCD1Q96GM5 515 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 PRKD2Q9BZL6 878 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 TSPYL2Q9H2G4 693 aaPredicted RBP19.3■□□□□ 0.68
LSM12-201ENST00000293406 OLAHQ9NV23 265 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 ZNF236Q9UL36 1845 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 TRAF6Q9Y4K3 522 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.3■□□□□ 0.68
LSM12-201ENST00000293406 PTCH2Q9Y6C5 1203 aa19.3■□□□□ 0.68
LSM12-201ENST00000293406 HTRA2O43464 458 aaPredicted RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 DDNO94850 711 aaPredicted RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 RBP1P09455 135 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 HSPA8P11142 646 aaKnown RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 ALDH3B2P48448 385 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 MAP7D1Q3KQU3 841 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 TWF2Q6IBS0 349 aaKnown RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 DPP9Q86TI2 863 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 OR9I1Q8NGQ6 314 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 GRIN3AQ8TCU5 1115 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 GAB3Q8WWW8 586 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 TMIGD2Q96BF3 282 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 PPP1R2P1Q96PQ5 205 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 RHOBTB2Q9BYZ6 727 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 UPF3AQ9H1J1 476 aaKnown RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 CIDEBQ9UHD4 219 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 NEU3Q9UQ49 428 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 SQORQ9Y6N5 450 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 ZNF839A8K0R7 811 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 TIPRLO75663 272 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 HLA-DQB2P05538 268 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 YWHAQP27348 245 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 CDK9P50750 372 aaKnown RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 SLC7A2P52569 658 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 GALNT1Q10472 559 aaPredicted RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 DCTN2Q13561 401 aaKnown RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 ZNF789Q5FWF6 425 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 HACD2Q6Y1H2 254 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 ERI1Q8IV48 349 aaKnown RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 TMEM86AQ8N2M4 240 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 DQX1Q8TE96 717 aaKnown RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 SLC39A3Q9BRY0 314 aa19.29■□□□□ 0.68
LSM12-201ENST00000293406 RBM22Q9NW64 420 aaKnown RBP eCLIP19.29■□□□□ 0.68
LSM12-201ENST00000293406 FNDC1Q4ZHG4 1894 aaPredicted RBP19.29■□□□□ 0.68
LSM12-201ENST00000293406 MT-CO1P00395 513 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 CKMT2P17540 419 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 CLEC6AQ6EIG7 209 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 C8orf82Q6P1X6 216 aaPredicted RBP19.28■□□□□ 0.68
LSM12-201ENST00000293406 RANBP10Q6VN20 620 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 LPCAT2Q7L5N7 544 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 SLC22A9Q8IVM8 553 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 MRGPRX2Q96LB1 330 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 RANBP9Q96S59 729 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 ANKRD60Q9BZ19 345 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 SLC39A8Q9C0K1 460 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 hCG_2014768A0A024R1R8 64 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 ATP6AP2A0A1C7CYW4 349 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 DYNC1LI2O43237 492 aaPredicted RBP19.28■□□□□ 0.68
LSM12-201ENST00000293406 AKAP10O43572 662 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 ATP6AP2O75787 350 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 F2P00734 622 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 CYP2C18P33260 490 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 CLCN5P51795 746 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 ACAP2Q15057 778 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 ANKFN1Q8N957 763 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 OR2T34Q8NGX1 318 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 OR2T3Q8NH03 318 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 TSPAN17Q96FV3 270 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 ABHD16BQ9H3Z7 469 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 CLK4Q9HAZ1 481 aaKnown RBP19.28■□□□□ 0.68
LSM12-201ENST00000293406 CDH9Q9ULB4 789 aa19.28■□□□□ 0.68
LSM12-201ENST00000293406 PFDN1O60925 122 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 GRIA3P42263 894 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 STX1BP61266 288 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 TUBA4AP68366 448 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 MYBPC3Q14896 1274 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 PCSK7Q16549 785 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 IQSEC1Q6DN90 963 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 PPP4R4Q6NUP7 873 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 LARP4Q71RC2 724 aaKnown RBP eCLIP19.27■□□□□ 0.68
LSM12-201ENST00000293406 LZTR1Q8N653 840 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 HM13Q8TCT9 377 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 CALML6Q8TD86 181 aa19.27■□□□□ 0.68
LSM12-201ENST00000293406 GTF3C2Q8WUA4 911 aaPredicted RBP19.27■□□□□ 0.68
LSM12-201ENST00000293406 CANT1Q8WVQ1 401 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms