RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 RPS12P25398 132 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 CLK3P49761 638 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 ZNF143P52747 638 aaPredicted RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 C1QTNF8P60827 252 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 RACK1P63244 317 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 OXA1LQ15070 435 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 CCDC14Q49A88 953 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 STK32CQ86UX6 486 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 FUNDC2Q9BWH2 189 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 ELOVL4Q9GZR5 314 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.9□□□□□ -0.34
HERC6-202ENST00000273960 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 CDH7Q9ULB5 785 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 SDHDO14521 159 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 NOBOXO60393 691 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 DDHD2O94830 711 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 INMTO95050 263 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 SNRPB2P08579 225 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 SHMT2P34897 504 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 MRPS15P82914 257 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 CSHL1Q14406 222 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 MEP1AQ16819 746 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 ARL13BQ3SXY8 428 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 LIPMQ5VYY2 423 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 CYP4V2Q6ZWL3 525 aaPredicted RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 SPATC1Q76KD6 591 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 BNIPLQ7Z465 357 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 R3HCC1LQ7Z5L2 792 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 POC5Q8NA72 575 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 CALML6Q8TD86 181 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 TRPC4APQ8TEL6 797 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 NRBF2Q96F24 287 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 DACH2Q96NX9 599 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 TRIT1Q9H3H1 467 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 SNPHO15079 494 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 TBX1O43435 398 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 JRKO75564 520 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 DGAT1O75907 488 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 LCP1P13796 627 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 MYF6P23409 242 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 SFNP31947 248 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 RPS9P46781 194 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 TRPC1P48995 793 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 PTPN11Q06124 597 aaPredicted RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 RPS6KA2Q15349 733 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 RABL3Q5HYI8 236 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 PAGE2Q7Z2X7 111 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 ITIH5Q86UX2 942 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 TMEM126BQ8IUX1 230 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 DENND6AQ8IWF6 608 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 LSMEM2Q8N112 164 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 EMID1Q96A84 441 aaPredicted RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 FAM149B1Q96BN6 582 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 MAELQ96JY0 434 aaKnown RBP12.9□□□□□ -0.34
HERC6-202ENST00000273960 RBBP8Q99708 897 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 HGH1Q9BTY7 390 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 HMG20AQ9NP66 347 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 ANKEF1Q9NU02 776 aa12.9□□□□□ -0.34
HERC6-202ENST00000273960 COL4A5P29400 1685 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ITGB3P05106 788 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ADSLP30566 484 aaPredicted RBP12.89□□□□□ -0.35
HERC6-202ENST00000273960 PLA2G4EQ3MJ16 856 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 FAM209AQ5JX71 171 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 JADE1Q6IE81 842 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 AKAP14Q86UN6 197 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 HS3ST5Q8IZT8 346 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
HERC6-202ENST00000273960 MCPH1Q8NEM0 835 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 NDNFQ8TB73 568 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 SEPT8Q92599 483 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ATP13A3Q9H7F0 1226 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 DTLQ9NZJ0 730 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 SNX2O60749 519 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 C8BP07358 591 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 CXCL8P10145 99 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 AGXTP21549 392 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ASPAP45381 313 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 CXCR3P49682 368 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 MPP1Q00013 466 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 KCTD2Q14681 263 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ZNF846Q147U1 533 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 SAMD4BQ5PRF9 694 aaKnown RBP12.89□□□□□ -0.35
HERC6-202ENST00000273960 KCNMB4Q86W47 210 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 CNTD1Q8N815 330 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 HMGCLL1Q8TB92 370 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 APBB2Q92870 758 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 COPS5Q92905 334 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 TMEM74Q96NL1 305 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 VPS33BQ9H267 617 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 TBC1D13Q9NVG8 400 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 SMPD3Q9NY59 655 aaPredicted RBP12.89□□□□□ -0.35
HERC6-202ENST00000273960 SUCOQ9UBS9 1254 aaKnown RBP12.89□□□□□ -0.35
HERC6-202ENST00000273960 BAG5Q9UL15 447 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms