RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 LEPRP48357 1165 aaKnown RBP15.4■□□□□ 0.06
SF3B4-201ENST00000271628 ARFIP2P53365 341 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 PRAMEP78395 509 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 IRX4P78413 519 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 OCRLQ01968 901 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 OVGP1Q12889 678 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 CDH18Q13634 790 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 MPP7Q5T2T1 576 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 CRLF3Q8IUI8 442 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 CFAP61Q8NHU2 1237 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 FEM1AQ9BSK4 669 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 MFSD1Q9H3U5 465 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 NMRAL1Q9HBL8 299 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 FAM95CA0A1B0GW59 222 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 CCDC22O60826 627 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 CRTAMO95727 393 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 CPA3P15088 417 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 STMN1P16949 149 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 CTNNB1P35222 781 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 NUMBP49757 651 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 ERVFC1P60507 584 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 RAB10P61026 200 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 ARF5P84085 180 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 MPP1Q00013 466 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 POU4F1Q01851 419 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 ACVR1Q04771 509 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 PCLAFQ15004 111 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 PPM1LQ5SGD2 360 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 HS6ST3Q8IZP7 471 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 RFWD2Q8NHY2 731 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 BLOC1S5Q8TDH9 187 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 STYXQ8WUJ0 223 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 HERVK_113Q902F9 699 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 TRIB3Q96RU7 358 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 DCTN4Q9UJW0 460 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 VPS28Q9UK41 221 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 ACOT9Q9Y305 439 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 ACTL7AQ9Y615 435 aa15.4■□□□□ 0.06
SF3B4-201ENST00000271628 A0A1W2PRU2 124 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 C2orf71A6NGG8 1288 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 GJB3O75712 270 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 HAUS5O94927 633 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 LMNAP02545 664 aaKnown RBP15.39■□□□□ 0.05
SF3B4-201ENST00000271628 DLDP09622 509 aaKnown RBP15.39■□□□□ 0.05
SF3B4-201ENST00000271628 GNAZP19086 355 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 ABCG1P45844 678 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 SLC12A2P55011 1212 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 DLG2Q15700 870 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 MPPE1Q53F39 396 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 FSCBQ5H9T9 825 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 RALGPS1Q5JS13 557 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 MBLAC2Q68D91 279 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 PLD6Q8N2A8 252 aaKnown RBP15.39■□□□□ 0.05
SF3B4-201ENST00000271628 ENDOVQ8N8Q3 282 aaKnown RBP15.39■□□□□ 0.05
SF3B4-201ENST00000271628 OR6P1Q8NGX9 317 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 DDI1Q8WTU0 396 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 HDAC10Q969S8 669 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 MIEF2Q96C03 454 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 CORO1BQ9BR76 489 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 PCDH10Q9P2E7 1040 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 A0A0G2JND7 137 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 PEX11AO75192 247 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 ZMPSTE24O75844 475 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 SERPINE1P05121 402 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 PRKCGP05129 697 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 SAT1P21673 171 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 KCNA4P22459 653 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 UBE3AQ05086 875 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 GALNT3Q14435 633 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 CILP2Q8IUL8 1156 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 MFN1Q8IWA4 741 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 ACVR1CQ8NER5 493 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 RDH11Q8TC12 318 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 POF1BQ8WVV4 589 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 RMDN1Q96DB5 314 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 SIKE1Q9BRV8 207 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 TDRD1Q9BXT4 1180 aaKnown RBP15.39■□□□□ 0.05
SF3B4-201ENST00000271628 ADGRE3Q9BY15 652 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 HEY2Q9UBP5 337 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 OR51B4Q9Y5P0 310 aa15.39■□□□□ 0.05
SF3B4-201ENST00000271628 CCDC195A0A1B0GUA6 201 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 GLP2RO95838 553 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 CD160O95971 181 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 F7P08709 466 aaPredicted RBP15.38■□□□□ 0.05
SF3B4-201ENST00000271628 TPBGLP0DKB5 382 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 RALBP11234 206 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 FGF3P11487 239 aaPredicted RBP15.38■□□□□ 0.05
SF3B4-201ENST00000271628 MYL4P12829 197 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 DDX6P26196 483 aaKnown RBP eCLIP15.38■□□□□ 0.05
SF3B4-201ENST00000271628 MZF1P28698 734 aaPredicted RBP15.38■□□□□ 0.05
SF3B4-201ENST00000271628 RGRP47804 291 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 CLCN4P51793 760 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 CLCN5P51795 746 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 KRT72Q14CN4 511 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 PLPP4Q5VZY2 271 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 RETSATQ6NUM9 610 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 PTAR1Q7Z6K3 402 aaPredicted RBP15.38■□□□□ 0.05
SF3B4-201ENST00000271628 C10orf107Q8IVU9 208 aa15.38■□□□□ 0.05
SF3B4-201ENST00000271628 DCAF4L2Q8NA75 395 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms