RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 SPDYAQ5MJ70 313 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 PIM3Q86V86 326 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 MDGA1Q8NFP4 955 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 HEXDCQ8WVB3 486 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 IFT43Q96FT9 208 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 ZNF599Q96NL3 588 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 YME1L1Q96TA2 773 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 FAM167BQ9BTA0 163 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 SAR1AQ9NR31 198 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.28■■□□□ 1.32
RAB40B-201ENST00000269347 ACOT9Q9Y305 439 aa23.28■■□□□ 1.32
RAB40B-201ENST00000269347 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.27■■□□□ 1.32
RAB40B-201ENST00000269347 GFRA2O00451 464 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 TBL1XO60907 577 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 ZMPSTE24O75844 475 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 PAPSS2O95340 614 aaPredicted RBP23.27■■□□□ 1.32
RAB40B-201ENST00000269347 GOT2P00505 430 aaKnown RBP23.27■■□□□ 1.32
RAB40B-201ENST00000269347 CA8P35219 290 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 ZNF177Q13360 481 aaPredicted RBP23.27■■□□□ 1.32
RAB40B-201ENST00000269347 ZNF549Q6P9A3 640 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 SHCBP1LQ9BZQ2 653 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 ZBP1Q9H171 429 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 MRPL17Q9NRX2 175 aaKnown RBP23.27■■□□□ 1.32
RAB40B-201ENST00000269347 STOML2Q9UJZ1 356 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 PCDHB12Q9Y5F1 795 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 CPQQ9Y646 472 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 CCDC162PA2VCL2 907 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 FGF18O76093 207 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 C1RP00736 705 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 KCNA5P22460 613 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 IDH3AP50213 366 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 ACVR1Q04771 509 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 VEPH1Q14D04 833 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 UGP2Q16851 508 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 ZYG11AQ6WRX3 759 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 SPRED2Q7Z698 418 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 SCYL1Q96KG9 808 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 CINPQ9BW66 212 aaPredicted RBP23.27■■□□□ 1.32
RAB40B-201ENST00000269347 CCDC106Q9BWC9 280 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 CADM1Q9BY67 442 aaKnown RBP23.27■■□□□ 1.32
RAB40B-201ENST00000269347 LRRC3Q9BY71 257 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 MFSD1Q9H3U5 465 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 BAIAP2L1Q9UHR4 511 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 LNPEPQ9UIQ6 1025 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 CRYL1Q9Y2S2 319 aa23.27■■□□□ 1.32
RAB40B-201ENST00000269347 TRAFD1O14545 582 aaPredicted RBP23.26■■□□□ 1.31
RAB40B-201ENST00000269347 TRIM13O60858 407 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 OLFM2O95897 454 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 MT-CO1P00395 513 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 SERPINF2P08697 491 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 GM2AP17900 193 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 GRK2P25098 689 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 MPSTP25325 297 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 ELF1P32519 619 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 SWT1Q5T5J6 900 aaKnown RBP23.26■■□□□ 1.31
RAB40B-201ENST00000269347 RPS27LQ71UM5 84 aaKnown RBP23.26■■□□□ 1.31
RAB40B-201ENST00000269347 LONP2Q86WA8 852 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 LSMEM2Q8N112 164 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 CARNMT1Q8N4J0 409 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 CXXC1Q9P0U4 656 aaPredicted RBP23.26■■□□□ 1.31
RAB40B-201ENST00000269347 SEPT3Q9UH03 358 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 ANKRD6Q9Y2G4 727 aa23.26■■□□□ 1.31
RAB40B-201ENST00000269347 PRR5-ARHGAP8B1AHC4 643 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 RAG1P15918 1043 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 SLC8A1P32418 973 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 HADHAP40939 763 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 GTF2A1P52655 376 aaPredicted RBP23.25■■□□□ 1.31
RAB40B-201ENST00000269347 ARHGAP8P85298 464 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 CSHL1Q14406 222 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 Q6ZNB5 142 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 CHST9Q7L1S5 443 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 TMC8Q8IU68 726 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 INPP5DQ92835 1189 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 SMG9Q9H0W8 520 aaKnown RBP23.25■■□□□ 1.31
RAB40B-201ENST00000269347 MUC3BQ9H195 1237 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 MAN1C1Q9NR34 630 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 OR51B4Q9Y5P0 310 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 VGLL3A8MV65 326 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 K7ERQ8 282 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 INSIG1O15503 277 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 SLC7A4O43246 635 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 KLHL2O95198 593 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 WISP3O95389 354 aaPredicted RBP23.25■■□□□ 1.31
RAB40B-201ENST00000269347 FGF1P05230 155 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 HLA-DPA1P20036 260 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 GABRR2P28476 465 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 PTPN4P29074 926 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 KCNC1P48547 511 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 EPHB3P54753 998 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 HECTD2Q5U5R9 776 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 WDR75Q8IWA0 830 aaKnown RBP23.25■■□□□ 1.31
RAB40B-201ENST00000269347 MAB21L3Q8N8X9 362 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 TXNDC5Q8NBS9 432 aaKnown RBP23.25■■□□□ 1.31
RAB40B-201ENST00000269347 ALG14Q96F25 216 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 NSL1Q96IY1 281 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 WWP1Q9H0M0 922 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 PLK2Q9NYY3 685 aa23.25■■□□□ 1.31
RAB40B-201ENST00000269347 PRRC2BQ5JSZ5 2229 aaKnown RBP23.25■■□□□ 1.31
RAB40B-201ENST00000269347 KIAA0355O15063 1070 aa23.24■■□□□ 1.31
RAB40B-201ENST00000269347 ENO1P06733 434 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms