RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 NUMBP49757 651 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 AP1S1P61966 158 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 NTHL1P78549 312 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 DBN1Q16643 649 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 INSCQ1MX18 579 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 ESRP1Q6NXG1 681 aaKnown RBP15.46■□□□□ 0.07
COPS3-201ENST00000268717 LVRNQ6Q4G3 990 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 TAX1BP1Q86VP1 789 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 WFDC5Q8TCV5 224 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 BRSK1Q8TDC3 778 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 EDAQ92838 391 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 LMLNQ96KR4 655 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 MYADMQ96S97 322 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 SRPK1Q96SB4 655 aaKnown RBP15.46■□□□□ 0.07
COPS3-201ENST00000268717 IQCGQ9H095 443 aaKnown RBP15.46■□□□□ 0.07
COPS3-201ENST00000268717 EPS15L1Q9UBC2 864 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 LHX3Q9UBR4 397 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 CCL26Q9Y258 94 aa15.46■□□□□ 0.07
COPS3-201ENST00000268717 FAM86C2PA6NEL3 165 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 GOLGA8RI6L899 631 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 SLC9A3R1O14745 358 aaPredicted RBP15.46■□□□□ 0.06
COPS3-201ENST00000268717 SLC7A4O43246 635 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 SNAP91O60641 907 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 FSHRP23945 695 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 PSMA3P25788 255 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 RGRP47804 291 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 SERPINB8P50452 374 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 ZXDAP98168 799 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 PPARDQ03181 441 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 SEPT6Q14141 434 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 PLEKHG6Q3KR16 790 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 TMEM31Q5JXX7 168 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 GET4Q7L5D6 327 aaPredicted RBP15.46■□□□□ 0.06
COPS3-201ENST00000268717 CPLX4Q7Z7G2 160 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 GDAP1Q8TB36 358 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 SPOCK2Q92563 424 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 ATP2A3Q93084 1043 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 AGAP2Q99490 1192 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 KLF6Q99612 283 aaPredicted RBP15.46■□□□□ 0.06
COPS3-201ENST00000268717 SMG9Q9H0W8 520 aaKnown RBP15.46■□□□□ 0.06
COPS3-201ENST00000268717 RHOJQ9H4E5 214 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 IARS2Q9NSE4 1012 aaKnown RBP15.46■□□□□ 0.06
COPS3-201ENST00000268717 ABCB8Q9NUT2 735 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 MARK1Q9P0L2 795 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 SLC17A6Q9P2U8 582 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 PLLPQ9Y342 182 aa15.46■□□□□ 0.06
COPS3-201ENST00000268717 LDB2O43679 373 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 VAPBO95292 243 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 ASGR2P07307 311 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 SCNN1BP51168 640 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 PDE1BQ01064 536 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 LMAN2Q12907 356 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 THOC5Q13769 683 aaKnown RBP15.45■□□□□ 0.06
COPS3-201ENST00000268717 CNGA3Q16281 694 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 NCEH1Q6PIU2 408 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 KYAT3Q6YP21 454 aaKnown RBP15.45■□□□□ 0.06
COPS3-201ENST00000268717 KDELC2Q7Z4H8 507 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 LCA5Q86VQ0 697 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 LRRC34Q8IZ02 419 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 NDUFAF2Q8N183 169 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 C2CD4AQ8NCU7 369 aaPredicted RBP15.45■□□□□ 0.06
COPS3-201ENST00000268717 SCG3Q8WXD2 468 aaKnown RBP15.45■□□□□ 0.06
COPS3-201ENST00000268717 GRAMD1AQ96CP6 724 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 GPR22Q99680 433 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 ADGRE3Q9BY15 652 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 MFSD1Q9H3U5 465 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 MLXIPLQ9NP71 852 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 IL1RAPL1Q9NZN1 696 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 SORCS3Q9UPU3 1222 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 ACTL7AQ9Y615 435 aa15.45■□□□□ 0.06
COPS3-201ENST00000268717 TTC24A2A3L6 582 aaPredicted RBP15.44■□□□□ 0.06
COPS3-201ENST00000268717 TCP11X1B4DZS4 312 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 TPP1O14773 563 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 GLRA3O75311 464 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 PRAMEF12O95522 483 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 MPOP05164 745 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 GSTA1P08263 222 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 VIMP08670 466 aaKnown RBP15.44■□□□□ 0.06
COPS3-201ENST00000268717 LAMP2P13473 410 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 TAC1P20366 129 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 CSRP3P50461 194 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 RHOAP61586 193 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 DMC1Q14565 340 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 GKAP1Q5VSY0 366 aaPredicted RBP15.44■□□□□ 0.06
COPS3-201ENST00000268717 FSTL4Q6MZW2 842 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 TPGS1Q6ZTW0 290 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 ZC3HC1Q86WB0 502 aaKnown RBP15.44■□□□□ 0.06
COPS3-201ENST00000268717 TTC16Q8NEE8 873 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 OR13J1Q8NGT2 312 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 LRFN3Q9BTN0 628 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 SLC2A11Q9BYW1 496 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 SPHK2Q9NRA0 654 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■□□□□ 11.3
COPS3-201ENST00000268717 SLC2A6Q9UGQ3 507 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 DCDC2Q9UHG0 476 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 GRID1Q9ULK0 1009 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 MRPS23Q9Y3D9 190 aaKnown RBP15.44■□□□□ 0.06
COPS3-201ENST00000268717 RAI2Q9Y5P3 530 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 ZDBF2Q9HCK1 2354 aa15.44■□□□□ 0.06
COPS3-201ENST00000268717 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms