RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 BCAP29Q9UHQ4 241 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 COMMD3-BMI1R4GMX3 469 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 NYNRINQ9P2P1 1898 aaKnown RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 A8MT66 165 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 SEPT4O43236 478 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 RNASEH2AO75792 299 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 CPB1P15086 417 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ZNF26P17031 533 aaPredicted RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 EN2P19622 333 aaPredicted RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 CALRP27797 417 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 CDKL1Q00532 357 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 MYBPC1Q00872 1141 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 NXNQ6DKJ4 435 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ZNF470Q6ECI4 717 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 C14orf80Q86SX3 495 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 LRRC49Q8IUZ0 686 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ZNF683Q8IZ20 524 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 AHI1Q8N157 1196 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.53□□□□□ -0.4
BEST3-201ENST00000266661 CCNYL1Q8N7R7 359 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 RTL3Q8N8U3 475 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 OR10T2Q8NGX3 314 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 CASP10Q92851 521 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 TADA1Q96BN2 335 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 FCRL2Q96LA5 508 aaPredicted RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 TMEM209Q96SK2 561 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 CATSPERBQ9H7T0 1116 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 COPS7BQ9H9Q2 264 aaPredicted RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 RBM22Q9NW64 420 aaKnown RBP eCLIP12.53□□□□□ -0.4
BEST3-201ENST00000266661 PLK2Q9NYY3 685 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 PCDH10Q9P2E7 1040 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 SUCOQ9UBS9 1254 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 CD300AQ9UGN4 299 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 NLRC5Q86WI3 1866 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 H0YJX3 145 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 CFLARO15519 480 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 PMPCBO75439 489 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 CHRNA1P02708 482 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ODC1P11926 461 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 HNRNPLP14866 589 aaKnown RBP eCLIP12.53□□□□□ -0.4
BEST3-201ENST00000266661 ARSAP15289 507 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 PAMP19021 973 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 PMLP29590 882 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 WNT3AP56704 352 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 PSME3P61289 254 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 TNK2Q07912 1038 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 MGAT3Q09327 533 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ART3Q13508 389 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 RARS2Q5T160 578 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 GK5Q6ZS86 529 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 SATL1Q86VE3 508 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 RNF148Q8N7C7 305 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 RNF34Q969K3 372 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ASB9Q96DX5 294 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 FAR2Q96K12 515 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 LRGUKQ96M69 825 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 UHRF1Q96T88 793 aaPredicted RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 UNKQ9C0B0 810 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 SENP6Q9GZR1 1112 aaPredicted RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
BEST3-201ENST00000266661 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 ABCC13Q9NSE7 274 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 FNIP2Q9P278 1114 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 AP4B1Q9Y6B7 739 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 PTPRDP23468 1912 aa12.53□□□□□ -0.4
BEST3-201ENST00000266661 E7ENX8 843 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 VILLO15195 856 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 ZNF623O75123 536 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 OR6B1O95007 311 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 RTN3O95197 1032 aaPredicted RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 PAPSS2O95340 614 aaPredicted RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 PENKP01210 267 aaPredicted RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 MMP2P08253 660 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 AKR1A1P14550 325 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 CCR1P32246 355 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 BRCC3P46736 316 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 CLCN5P51795 746 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 MLLT6P55198 1093 aaPredicted RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 APOFQ13790 326 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 TRIM25Q14258 630 aaKnown RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 RBBP5Q15291 538 aaKnown RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 NOMO2Q5JPE7 1267 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 OR13J1Q8NGT2 312 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 ANKRD49Q8WVL7 239 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 CCDC126Q96EE4 140 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 SGF29Q96ES7 293 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 IMP4Q96G21 291 aaKnown RBP12.52□□□□□ -0.41
BEST3-201ENST00000266661 GSTO2Q9H4Y5 243 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 CACNA2D2Q9NY47 1150 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 HS3ST4Q9Y661 456 aa12.52□□□□□ -0.41
BEST3-201ENST00000266661 E9PAM4 449 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms