RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 C11orf24Q96F05 449 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ZNF285Q96NJ3 590 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SLC25A23Q9BV35 468 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 HCN3Q9P1Z3 774 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 L1RE1Q9UN81 338 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 FAM86C2PA6NEL3 165 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 KCNK1O00180 336 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CCNDBP1O95273 360 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 B3GNT6Q6ZMB0 384 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 STOX1Q6ZVD7 989 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 VANGL1Q8TAA9 524 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 LENG9Q96B70 501 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 C2orf49Q9BVC5 232 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 RIMKLBQ9ULI2 386 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 NOX1Q9Y5S8 564 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 EPHX2P34913 555 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ALG1LQ6GMV1 187 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ZCCHC12Q6PEW1 402 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TBATAQ96M53 351 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 IMP3Q9NV31 184 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CROCC2H7BZ55 1655 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 GAKO14976 1311 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TUFMP49411 452 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SLC12A3P55017 1021 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 CAV3P56539 151 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 TNK2Q07912 1038 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 IKBKEQ14164 716 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SF1Q15637 639 aaKnown RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 UBE2R2Q712K3 238 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ARMCX6Q7L4S7 300 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 NAT14Q8WUY8 206 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 NYAP2Q9P242 653 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 ZBTB11O95625 1053 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 FSHRP23945 695 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SQLEQ14534 574 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 MFSD10Q14728 455 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 USF2Q15853 346 aaPredicted RBP11.43□□□□□ -0.58
PTPN4-201ENST00000263708 SLC15A2Q16348 729 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 BMT2Q1RMZ1 405 aa11.43□□□□□ -0.58
PTPN4-201ENST00000263708 EFR3AQ14156 821 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 ZNF227Q86WZ6 799 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 FAM151AQ8WW52 585 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 TMEM168Q9H0V1 697 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 TUT1Q9H6E5 874 aaKnown RBP11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 LYPLAL1Q5VWZ2 237 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 NAT16Q8N8M0 369 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CCDC86Q9H6F5 360 aaKnown RBP11.42□□□□□ -0.58
PTPN4-201ENST00000263708 OSER1Q9NX31 292 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 MRPS33Q9Y291 106 aaKnown RBP11.42□□□□□ -0.58
PTPN4-201ENST00000263708 SLC37A4O43826 429 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 USP12O75317 370 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 ENTPD3O75355 529 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CDH5P33151 784 aaPredicted RBP11.42□□□□□ -0.58
PTPN4-201ENST00000263708 SPESP1Q6UW49 350 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CADM2Q8N3J6 435 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 SLC2A14Q8TDB8 520 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 PANX1Q96RD7 426 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 TM6SF2Q9BZW4 377 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 NAALADL1Q9UQQ1 740 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 MAGEA12P43365 314 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CASP5P51878 434 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CAPZA1P52907 286 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 TTC37Q6PGP7 1564 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 MPP5Q8N3R9 675 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 OR2L8Q8NGY9 312 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 NKX2-3Q8TAU0 364 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CD101Q93033 1021 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 ABCB9Q9NP78 766 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 BTRCQ9Y297 605 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 ADSSP30520 456 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 SOX10P56693 466 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CHAF1BQ13112 559 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 FBXO28Q9NVF7 368 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 NDNQ99608 321 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 RRN3Q9NYV6 651 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 NR2E3Q9Y5X4 410 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CDK12Q9NYV4 1490 aaPredicted RBP11.42□□□□□ -0.58
PTPN4-201ENST00000263708 TMPRSS11AQ6ZMR5 421 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 AKAP14Q86UN6 197 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 MINDY2Q8NBR6 621 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 C11orf65Q8NCR3 313 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 ANKRD27Q96NW4 1050 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 CHCHD6Q9BRQ6 235 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 AKAP8O43823 692 aaKnown RBP11.42□□□□□ -0.58
PTPN4-201ENST00000263708 RARGP13631 454 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 TSPAN8P19075 237 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 ATP5C1P36542 298 aaKnown RBP11.42□□□□□ -0.58
PTPN4-201ENST00000263708 VLDLRP98155 873 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 MAPK14Q16539 360 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 KLHL35Q6PF15 583 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 SLC34A3Q8N130 599 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 COQ8BQ96D53 544 aa11.42□□□□□ -0.58
PTPN4-201ENST00000263708 LINC00032P0C843 101 aa11.41□□□□□ -0.58
PTPN4-201ENST00000263708 TXNL4AP83876 142 aaKnown RBP11.41□□□□□ -0.58
PTPN4-201ENST00000263708 GALNT18Q6P9A2 607 aa11.41□□□□□ -0.58
PTPN4-201ENST00000263708 RAD9BQ6WBX8 426 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms