RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 WLSQ5T9L3 541 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 VWA5B1Q5TIE3 1220 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 AGAP9Q5VTM2 703 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 KLC3Q6P597 504 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 EPGNQ6UW88 154 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 BRSK1Q8TDC3 778 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 HEXDCQ8WVB3 486 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 PSKH2Q96QS6 385 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 NUDCD1Q96RS6 583 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 NDNQ99608 321 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 HERC2P3Q9BVR0 1158 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 GKN1Q9NS71 199 aa13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 NOP53Q9NZM5 478 aaKnown RBP13.01□□□□□ -0.33
SPTLC1-201ENST00000262554 COL4A6Q14031 1691 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 A0A1B0GVM2 712 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 TCAF2A6NFQ2 919 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 PIGNO95427 931 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 GLP2RO95838 553 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 LMNAP02545 664 aaKnown RBP13□□□□□ -0.33
SPTLC1-201ENST00000262554 LTA4HP09960 611 aaKnown RBP13□□□□□ -0.33
SPTLC1-201ENST00000262554 IRF1P10914 325 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 RFC2P35250 354 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 RPL14P50914 215 aaKnown RBP13□□□□□ -0.33
SPTLC1-201ENST00000262554 ARSDP51689 593 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 ACVR1Q04771 509 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 PRKAA1Q13131 559 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 CSHL1Q14406 222 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 GALNT3Q14435 633 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 FSCBQ5H9T9 825 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 HECTD2Q5U5R9 776 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 TMC7Q7Z402 723 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 SPATA6LQ8N4H0 392 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 OR52K2Q8NGK3 314 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 PDCD6IPQ8WUM4 868 aaKnown RBP13□□□□□ -0.33
SPTLC1-201ENST00000262554 TOP1MTQ969P6 601 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 OLFM1Q99784 485 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 KLF16Q9BXK1 252 aaPredicted RBP13□□□□□ -0.33
SPTLC1-201ENST00000262554 C1orf21Q9H246 121 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 RNPEPL1Q9HAU8 725 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 AGO1Q9UL18 857 aaKnown RBP13□□□□□ -0.33
SPTLC1-201ENST00000262554 RIMKLBQ9ULI2 386 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 VWA7Q9Y334 891 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 KCTD3Q9Y597 815 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 ARL5AQ9Y689 179 aa13□□□□□ -0.33
SPTLC1-201ENST00000262554 C2orf78A6NCI8 922 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 SLCO1B7G3V0H7 640 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CCL22O00626 93 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 MAGEC1O60732 1142 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 PEX11AO75192 247 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 RPP40O75818 363 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 SNUPNO95149 360 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 S1PR4O95977 384 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 URODP06132 367 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CHRNGP07510 517 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CES1P23141 567 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 MPSTP25325 297 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 ELF1P32519 619 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 RAB33AQ14088 237 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 ARL13AQ5H913 290 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 SEL1L3Q68CR1 1132 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 MRNIPQ6NTE8 343 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 RBM15BQ8NDT2 890 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 AGR3Q8TD06 166 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CCDC126Q96EE4 140 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 TBATAQ96M53 351 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 RNF38Q9H0F5 515 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 GPAMQ9HCL2 828 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 IGSF5Q9NSI5 407 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 TMEM39AQ9NV64 488 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 NCKIPSDQ9NZQ3 722 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 VTI1BQ9UEU0 232 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 TBX21Q9UL17 535 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 ACTL7AQ9Y615 435 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 PLXNA4Q9HCM2 1894 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 OR51F1A6NGY5 319 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CBX4O00257 560 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 MATN2O00339 956 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 HDAC3O15379 428 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CD3EAPO15446 510 aaKnown RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 INSIG1O15503 277 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 NPHS1O60500 1241 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 TSPAN3O60637 253 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CRTAMO95727 393 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 RBP1P09455 135 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 CCDC166P0CW27 439 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 GM2AP17900 193 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 LAG3P18627 525 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 GLDCP23378 1020 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 ATP5F1P24539 256 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 SCNN1BP51168 640 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 SGSHP51688 502 aa12.99□□□□□ -0.33
SPTLC1-201ENST00000262554 EPHB3P54753 998 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms