RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ATG4AQ8WYN0 398 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 LRRC45Q96CN5 670 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 RMDN1Q96DB5 314 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 TOE1Q96GM8 510 aaKnown RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 LRIG1Q96JA1 1093 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 QKIQ96PU8 341 aaKnown RBP eCLIP11.68□□□□□ -0.542e-14■■■■■ 137.8
PFDN1-201ENST00000261813 VAT1Q99536 393 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 IL12RB2Q99665 862 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 OMDQ99983 421 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 CEP41Q9BYV8 373 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 CPEB1Q9BZB8 566 aaKnown RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 DUSP15Q9H1R2 295 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 NEUROG2Q9H2A3 272 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 EPC1Q9H2F5 836 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 C10orf88Q9H8K7 445 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 NT5MQ9NPB1 228 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 RBM22Q9NW64 420 aaKnown RBP eCLIP11.68□□□□□ -0.54
PFDN1-201ENST00000261813 FBXL12Q9NXK8 326 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 WDR87Q6ZQQ6 2873 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 PLXND1Q9Y4D7 1925 aa11.68□□□□□ -0.54
PFDN1-201ENST00000261813 SIAH2O43255 324 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RAD51CO43502 376 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 JCHAINP01591 159 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RHOXF2BP0C7M4 288 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 OXTRP30559 389 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PTGIRP43119 386 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SCNN1BP51168 640 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RAD51Q06609 339 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 CUL1Q13616 776 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 IHHQ14623 411 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ERCC6LQ2NKX8 1250 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 AGBL4Q5VU57 503 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PMS2CLQ68D20 193 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ALG1LQ6GMV1 187 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 TTC27Q6P3X3 843 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 NCEH1Q6PIU2 408 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 GDPD4Q6W3E5 623 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PRR23BQ6ZRT6 265 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 CEP68Q76N32 757 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PARS2Q7L3T8 475 aaKnown RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 JAMLQ86YT9 394 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 CAMK1DQ8IU85 385 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 CNTD1Q8N815 330 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SUMF1Q8NBK3 374 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 GANCQ8TET4 914 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 KLHL32Q96NJ5 620 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PPP1R2P1Q96PQ5 205 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 NUDCD1Q96RS6 583 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RHOXF2Q9BQY4 288 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ERP44Q9BS26 406 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 OSBPL1AQ9BXW6 950 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 BTBD1Q9H0C5 482 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 NOD2Q9HC29 1040 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 FAM114A2Q9NRY5 505 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SEPT10Q9P0V9 454 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 FZD4Q9ULV1 537 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 NCKAP1Q9Y2A7 1128 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ATP8A1Q9Y2Q0 1164 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SHROOM3Q8TF72 1996 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ZNF292O60281 2723 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 C16orf96A6NNT2 1141 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 TTI1O43156 1089 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 HEXIM1O94992 359 aaKnown RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 KRT14P02533 472 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ITGB7P26010 798 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PTPN3P26045 913 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RBL1P28749 1068 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 KCNJ1P48048 391 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ADPRHP54922 357 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 TAS2R38P59533 333 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 AP1S1P61966 158 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 DSC2Q02487 901 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RPL6Q02878 288 aaKnown RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 CAV1Q03135 178 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ITKQ08881 620 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 NIPAL4Q0D2K0 466 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 WASHC5Q12768 1159 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SFSWAPQ12872 951 aaKnown RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PTK6Q13882 451 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 LPAL2Q16609 132 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 P3H1Q32P28 736 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ZNF805Q5CZA5 627 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PIP5KL1Q5T9C9 394 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 WDR93Q6P2C0 686 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SLC36A4Q6YBV0 504 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ERN2Q76MJ5 926 aaKnown RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 C11orf74Q86VG3 221 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ZSWIM9Q86XI8 627 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 TMEFF1Q8IYR6 380 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 DEFB119Q8N690 84 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ARRDC2Q8TBH0 407 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 HTR3CQ8WXA8 447 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 RTP4Q96DX8 246 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PPP1R16AQ96I34 528 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 ZC3H10Q96K80 434 aaKnown RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 TUBGCP5Q96RT8 1024 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SEMA3CQ99985 751 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms