RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 IL25Q9H293 177 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 PRKAR1AP10644 381 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 AXLP30530 894 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 IKBKEQ14164 716 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 DEPDC4Q8N2C3 294 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 VAT1Q99536 393 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 SPAG4Q9NPE6 437 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 PGM3O95394 542 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 MLYCDO95822 493 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 IL12AP29459 219 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 IL18R1Q13478 541 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 KCNA10Q16322 511 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 MPPE1Q53F39 396 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 GPR107Q5VW38 600 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 DENND5AQ6IQ26 1287 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 WDR59Q6PJI9 974 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 FAM183BPQ6ZVS7 135 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 ETNPPLQ8TBG4 499 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 KCTD4Q8WVF5 259 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 PIH1D2Q8WWB5 315 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 TP53INP1Q96A56 240 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 EQTNQ9NQ60 294 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 ZNF214Q9UL59 606 aaPredicted RBP14.35□□□□□ -0.11
CUX2-201ENST00000261726 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 FTH1P02794 183 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 RAB2AP61019 212 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 USP41Q3LFD5 358 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 TTC27Q6P3X3 843 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 VANGL1Q8TAA9 524 aaPredicted RBP14.35□□□□□ -0.11
CUX2-201ENST00000261726 FAM129BQ96TA1 746 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 SAR1AQ9NR31 198 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 FGF10O15520 208 aaPredicted RBP14.35□□□□□ -0.11
CUX2-201ENST00000261726 RNF19BQ6ZMZ0 732 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 ATP6V1C2Q8NEY4 427 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 ASB7Q9H672 318 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 IRAK3Q9Y616 596 aa14.35□□□□□ -0.11
CUX2-201ENST00000261726 ASTN2O75129 1339 aaPredicted RBP14.35□□□□□ -0.11
CUX2-201ENST00000261726 RARRES1P49788 294 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 OAFQ86UD1 273 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 CROCCP3Q8IVE0 287 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 C2orf73Q8N5S3 287 aaPredicted RBP14.34□□□□□ -0.11
CUX2-201ENST00000261726 KBTBD8Q8NFY9 601 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ANKRD27Q96NW4 1050 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 CNPPD1Q9BV87 410 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 FZD1Q9UP38 647 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 OPLAHO14841 1288 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 HDCP19113 662 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 MAXP61244 160 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 PABPC1LQ4VXU2 614 aaKnown RBP14.34□□□□□ -0.11
CUX2-201ENST00000261726 TMEM63BQ5T3F8 832 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 HECTD3Q5T447 861 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 OR10H5Q8NGA6 315 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 EMID1Q96A84 441 aaPredicted RBP14.34□□□□□ -0.11
CUX2-201ENST00000261726 L2HGDHQ9H9P8 463 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ASAH2Q9NR71 780 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 CCNB1P14635 433 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 TCF4P15884 667 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 SMIM11AP58511 58 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 PSME3P61289 254 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 BNC1Q01954 994 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ZNF410Q86VK4 478 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 WNT8BQ93098 351 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 PPP3R2Q96LZ3 170 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 GSDMCQ9BYG8 508 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 RNF208Q9H0X6 261 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 TMCO1Q9UM00 188 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 SLC27A5Q9Y2P5 690 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ANKRD63C9JTQ0 380 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 MAGEC1O60732 1142 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ZNF432O94892 652 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 PGK1P00558 417 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 MAPTP10636 758 aaKnown RBP14.34□□□□□ -0.11
CUX2-201ENST00000261726 HGFP14210 728 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 IGFALSP35858 605 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 CPSF6Q16630 551 aaKnown RBP eCLIP14.34□□□□□ -0.11
CUX2-201ENST00000261726 SMU1Q2TAY7 513 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 IRGCQ6NXR0 463 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 WDR60Q8WVS4 1066 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ACAT2Q9BWD1 397 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 KIAA1683Q9H0B3 1180 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 SPATA31A1Q5TZJ5 1347 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 DBIP07108 87 aaKnown RBP14.34□□□□□ -0.11
CUX2-201ENST00000261726 CTNNB1P35222 781 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 TTPAP49638 278 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 PDK3Q15120 406 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 GPRIN3Q6ZVF9 776 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ATCAYQ86WG3 371 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 FCRL4Q96PJ5 515 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 MORF4L1Q9UBU8 362 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 C3orf18Q9UK00 162 aa14.34□□□□□ -0.11
CUX2-201ENST00000261726 ACKR2O00590 384 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 TIPRLO75663 272 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 C9P02748 559 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 MADCAM1Q13477 382 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 MAP1SQ66K74 1059 aaPredicted RBP14.33□□□□□ -0.11
CUX2-201ENST00000261726 C12orf56Q8IXR9 622 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 OR52K2Q8NGK3 314 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 FAR1Q8WVX9 515 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 VCPIP1Q96JH7 1222 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms