RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 SCUBE2Q9NQ36 999 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 RBM22Q9NW64 420 aaKnown RBP eCLIP14.34□□□□□ -0.11
CNN1-201ENST00000252456 AMACRQ9UHK6 382 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 PACSIN2Q9UNF0 486 aaPredicted RBP14.34□□□□□ -0.11
CNN1-201ENST00000252456 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 PCNX2A6NKB5 2137 aa14.34□□□□□ -0.11
CNN1-201ENST00000252456 NEMP1O14524 444 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 KCNK3O14649 394 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 MMP20O60882 483 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 FTCDO95954 541 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 CD59P13987 128 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 TGM2P21980 687 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 PTPN7P35236 360 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 NR2C2P49116 596 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 NXPH1P58417 271 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 DSC2Q02487 901 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 PRKD1Q15139 912 aaPredicted RBP14.33□□□□□ -0.11
CNN1-201ENST00000252456 ZNF423Q2M1K9 1284 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 AADACL2Q6P093 401 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 IL27RAQ6UWB1 636 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 BBS12Q6ZW61 710 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 ADAT2Q7Z6V5 191 aaKnown RBP14.33□□□□□ -0.11
CNN1-201ENST00000252456 ABI3BPQ7Z7G0 1075 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 IQCHQ86VS3 1027 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 SPATS2Q86XZ4 545 aaKnown RBP14.33□□□□□ -0.11
CNN1-201ENST00000252456 CCDC50Q8IVM0 306 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 ASB12Q8WXK4 309 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 WRAP53Q9BUR4 548 aaKnown RBP14.33□□□□□ -0.11
CNN1-201ENST00000252456 HEMGNQ9BXL5 484 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 GPR27Q9NS67 375 aa14.33□□□□□ -0.11
CNN1-201ENST00000252456 TLR4O00206 839 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 DDX3YO15523 660 aaKnown RBP14.33□□□□□ -0.12
CNN1-201ENST00000252456 ZNF500O60304 480 aaPredicted RBP14.33□□□□□ -0.12
CNN1-201ENST00000252456 FZD6O60353 706 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 OPHN1O60890 802 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 CER1O95813 267 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 JCHAINP01591 159 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 MMP2P08253 660 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 PYGMP11217 842 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 CLDN2P57739 230 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 COPS2P61201 443 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 ELP6Q0PNE2 266 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 AP1B1Q10567 949 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 CFAP58Q5T655 872 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 KDM7AQ6ZMT4 941 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 PEX26Q7Z412 305 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 PIP4P1Q86T03 277 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 SLC22A18ASQ8N1D0 253 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 RNF10Q8N5U6 811 aaKnown RBP14.33□□□□□ -0.12
CNN1-201ENST00000252456 BMFQ96LC9 184 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 LENG8Q96PV6 779 aaPredicted RBP14.33□□□□□ -0.12
CNN1-201ENST00000252456 CEP41Q9BYV8 373 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 AMFRQ9UKV5 643 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 PCDHB9Q9Y5E1 797 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 NCOR2Q9Y618 2525 aa14.33□□□□□ -0.12
CNN1-201ENST00000252456 POM121BA6NF01 834 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 PPP1R12AO14974 1030 aaPredicted RBP14.32□□□□□ -0.12
CNN1-201ENST00000252456 PGLSO95336 258 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 PDHA1P08559 390 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 ZNF883P0CG24 379 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 XPAP23025 273 aaPredicted RBP14.32□□□□□ -0.12
CNN1-201ENST00000252456 AKT2P31751 481 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 RWDD2BP57060 319 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 C21orf59P57076 290 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 OVGP1Q12889 678 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 STAT4Q14765 748 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 SHBQ15464 509 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 PRAMEF14Q5SWL7 426 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 ZNF662Q6ZS27 426 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 SYCE1Q8N0S2 351 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.32□□□□□ -0.12
CNN1-201ENST00000252456 OR13H1Q8NG92 308 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 CENPTQ96BT3 561 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 HAUS1Q96CS2 278 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 HES6Q96HZ4 224 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 OSBPL8Q9BZF1 889 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 TSGA10Q9BZW7 698 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 BRD8Q9H0E9 1235 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 KCNF1Q9H3M0 494 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 TM7SF3Q9NS93 570 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 GUCA1BQ9UMX6 200 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 EFR3BQ9Y2G0 817 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 COQ6Q9Y2Z9 468 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 RAI2Q9Y5P3 530 aa14.32□□□□□ -0.12
CNN1-201ENST00000252456 TM7SF2O76062 418 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 PRLP01236 227 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 CCDC175P0C221 793 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 C6P13671 934 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 GM2AP17900 193 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 LIG3P49916 1009 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 ITKQ08881 620 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 WASHC5Q12768 1159 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 PTPRRQ15256 657 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 DBX2Q6ZNG2 339 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 DPPA4Q7L190 304 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 TP53I13Q8NBR0 393 aaPredicted RBP14.31□□□□□ -0.12
CNN1-201ENST00000252456 DENND6BQ8NEG7 585 aa14.31□□□□□ -0.12
CNN1-201ENST00000252456 CXorf40AQ8TE69 158 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms