RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 KLHL41O60662 606 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 GLDCP23378 1020 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 ATN1P54259 1190 aaPredicted RBP25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 GALNT3Q14435 633 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 FAM83EQ2M2I3 478 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 TECRLQ5HYJ1 363 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 SEL1L3Q68CR1 1132 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 IL31Q6EBC2 164 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 LDB1Q86U70 411 aaPredicted RBP25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 BBS5Q8N3I7 341 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 CFAP61Q8NHU2 1237 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 BLOC1S5Q8TDH9 187 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 PEX13Q92968 403 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 MICAL3Q7RTP6 2002 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 NPHS1O60500 1241 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 KLKB1P03952 638 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 SERPINF2P08697 491 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 TFEBP19484 476 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 ATP5F1P24539 256 aaPredicted RBP25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 DNAJB13P59910 316 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 LAMB3Q13751 1172 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 KIAA1841Q6NSI8 718 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 SPNS2Q8IVW8 549 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 CMTM5Q96DZ9 223 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 SGF29Q96ES7 293 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 CLPTM1LQ96KA5 538 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 TBATAQ96M53 351 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 SEPT3Q9UH03 358 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 DCXO43602 365 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 KRT36O76013 467 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 STC2O76061 302 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 PARNO95453 639 aaKnown RBP25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 LTA4HP09960 611 aaKnown RBP25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 VEGFBP49765 207 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 NAA25Q14CX7 972 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 AGAP9Q5VTM2 703 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 NET1Q7Z628 596 aaPredicted RBP25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 STON2Q8WXE9 905 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 TRIB3Q96RU7 358 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 SPON2Q9BUD6 331 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 GPAMQ9HCL2 828 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 TRPM5Q9NZQ8 1165 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 VTI1BQ9UEU0 232 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 VWA7Q9Y334 891 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 ARL5AQ9Y689 179 aa25.31■■□□□ 1.64
TMEM55B-201ENST00000250489 SLCO1B7G3V0H7 640 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 KDELR3O43731 214 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 CLDN11O75508 207 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 PSMG1O95456 288 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 PRDX6P30041 224 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 OXCT1P55809 520 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 SLC25A3Q00325 362 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 PFKPQ01813 784 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 ANKRD33Q7Z3H0 272 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 CCNYL1Q8N7R7 359 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 BRSK1Q8TDC3 778 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 DNAJC1Q96KC8 554 aaKnown RBP25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 UBXN10Q96LJ8 280 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 MYRFLQ96LU7 910 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 PSKH2Q96QS6 385 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 POMKQ9H5K3 350 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 WDR55Q9H6Y2 383 aaPredicted RBP25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 SUDS3Q9H7L9 328 aaPredicted RBP25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 GKN1Q9NS71 199 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 UBA2Q9UBT2 640 aaPredicted RBP25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 OGDHLQ9ULD0 1010 aa25.3■■□□□ 1.64
TMEM55B-201ENST00000250489 GOLGA8QA0A0J9YX86 632 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 GOLGA8OA6NCC3 632 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 GOLGA8NF8WBI6 632 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 ABLIM3O94929 683 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 WISP3O95389 354 aaPredicted RBP25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 NDST3O95803 873 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 CCDC166P0CW27 439 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 CORO1AP31146 461 aaKnown RBP25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 SGSHP51688 502 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 KLF10Q13118 480 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 RCN1Q15293 331 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 ZNF461Q8TAF7 563 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 SCG3Q8WXD2 468 aaKnown RBP25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 CINPQ9BW66 212 aaPredicted RBP25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 SHCBP1LQ9BZQ2 653 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 HSFX1Q9UBD0 423 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 SLC7A8Q9UHI5 535 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 COL4A6Q14031 1691 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 F8W8V4 182 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 BUD23O43709 281 aaKnown RBP25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 CIB2O75838 187 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 CDKN2DP55273 166 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 PTPRCAPQ14761 206 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 PIWIL4Q7Z3Z4 852 aaKnown RBP25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 RNF135Q8IUD6 432 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 ANKRD49Q8WVL7 239 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 NCKIPSDQ9NZQ3 722 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 RIMKLBQ9ULI2 386 aa25.29■■□□□ 1.64
TMEM55B-201ENST00000250489 A0A088AWK7 358 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 NEMP2A6NFY4 417 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 VGLL3A8MV65 326 aa25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 RPP40O75818 363 aaKnown RBP25.28■■□□□ 1.64
TMEM55B-201ENST00000250489 GOT2P00505 430 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms