RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 CHRNB3Q05901 458 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 HNRNPDQ14103 355 aaKnown RBP13.39□□□□□ -0.27
CCDC117-201ENST00000249064 POU6F1Q14863 301 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 ADGRF2Q8IZF7 708 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 C17orf80Q9BSJ5 609 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 PLK2Q9NYY3 685 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 IFT80Q9P2H3 777 aaPredicted RBP13.39□□□□□ -0.27
CCDC117-201ENST00000249064 PSAT1Q9Y617 370 aa13.39□□□□□ -0.27
CCDC117-201ENST00000249064 SLX4Q8IY92 1834 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CLDN5O00501 218 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 PPEF2O14830 753 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 TSPAN3O60637 253 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 SNRPB2P08579 225 aaKnown RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CTSHP09668 335 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 ZNF460Q14592 562 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 NDUFA5Q16718 116 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CHSY3Q70JA7 882 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 GPR180Q86V85 440 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 LILRA2Q8N149 483 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 MCFD2Q8NI22 146 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 EDEM1Q92611 657 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 KLHL32Q96NJ5 620 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 XPR1Q9UBH6 696 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CACNG4Q9UBN1 327 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 MFHAS1Q9Y4C4 1052 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 NEMP2A6NFY4 417 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 H3BRB1 525 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 DFFAO00273 331 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 METTL18O95568 372 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 AZGP1P25311 298 aaKnown RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 ELK4P28324 431 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 KPNA2P52292 529 aaKnown RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CERS2Q96G23 380 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 SNX27Q96L92 541 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 GPR20Q99678 358 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 FSD1LQ9BXM9 530 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 POMKQ9H5K3 350 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 SIRPGQ9P1W8 387 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CNOT6Q9ULM6 557 aaKnown RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 C7orf72A4D263 438 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CHADO15335 359 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 CLK3P49761 638 aaKnown RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 KCNK10P57789 538 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 ADIGQ0VDE8 80 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 TCEAL1Q15170 157 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 ZFP69Q49AA0 526 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 VPS26BQ4G0F5 336 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 C8orf59Q8N0T1 100 aaPredicted RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 DEFB106AQ8N104 65 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 MAPK15Q8TD08 544 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 ZHX1-C8orf76Q96EF9 292 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 TBATAQ96M53 351 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 SCN3BQ9NY72 215 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
CCDC117-201ENST00000249064 BTBD3Q9Y2F9 522 aa13.38□□□□□ -0.27
CCDC117-201ENST00000249064 BHMG1C9JSJ3 638 aaPredicted RBP13.37□□□□□ -0.27
CCDC117-201ENST00000249064 PMPCBO75439 489 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 SERPINI2O75830 405 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 STBD1O95210 358 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 IL7RP16871 459 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 PSMB4P28070 264 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 OAZ1P54368 228 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 SLC25A11Q02978 314 aaKnown RBP13.37□□□□□ -0.27
CCDC117-201ENST00000249064 PRKCQQ04759 706 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 TRAF3Q13114 568 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 NOMO1Q15155 1222 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 STILQ15468 1287 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 CELF3Q5SZQ8 465 aaKnown RBP13.37□□□□□ -0.27
CCDC117-201ENST00000249064 PDZD4Q76G19 769 aaPredicted RBP13.37□□□□□ -0.27
CCDC117-201ENST00000249064 AGAP2Q99490 1192 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 BEX2Q9BXY8 128 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 DPEP3Q9H4B8 488 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCDC117-201ENST00000249064 GDAP2Q9NXN4 497 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 GNPTGQ9UJJ9 305 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 SCN9AQ15858 1988 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 CITO14578 2027 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 SLC15A5A6NIM6 579 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 H3BMQ9 156 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 NFKBIEO00221 500 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 CLPXO76031 633 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 ADORA2AP29274 412 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 BCAT1P54687 386 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 ECT2LQ008S8 904 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 DPYSQ14117 519 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 TMEM236Q5W0B7 351 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 RAP1GAP2Q684P5 730 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 NANOGP8Q6NSW7 305 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 P3H2Q8IVL5 708 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 PCDH19Q8TAB3 1148 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 PROX1Q92786 737 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 COG8Q96MW5 612 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 BDH2Q9BUT1 245 aa13.37□□□□□ -0.27
CCDC117-201ENST00000249064 RIBC2Q9H4K1 309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms