RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ARRB1P49407 418 aaPredicted RBP24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 PPP2R5EQ16537 467 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 LRRC73Q5JTD7 316 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 KYAT3Q6YP21 454 aaKnown RBP24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 GCNT7Q6ZNI0 430 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 ZSWIM9Q86XI8 627 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 CCDC50Q8IVM0 306 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 OLFM3Q96PB7 478 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 MYOCQ99972 504 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 SEMA3CQ99985 751 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 DESI2Q9BSY9 194 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 FZD3Q9NPG1 666 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 PHTF1Q9UMS5 762 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 PCDHGC4Q9Y5F7 938 aa24.52■■□□□ 1.52
SDF2L1-201ENST00000248958 LAMA1P25391 3075 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 CST8O60676 142 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 MMP20O60882 483 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 MMP12P39900 470 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 RXRGP48443 463 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 DYNLT1P63172 113 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 IFI35P80217 286 aaPredicted RBP24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 KRT35Q92764 455 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 NSMCE3Q96MG7 304 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 LGMNQ99538 433 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 KLF6Q99612 283 aaPredicted RBP24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 IL12RB2Q99665 862 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 TSGA10Q9BZW7 698 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 CA5BQ9Y2D0 317 aa24.51■■□□□ 1.51
SDF2L1-201ENST00000248958 hCG_1818297A0A087WSY0 165 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 TTC24A2A3L6 582 aaPredicted RBP24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 GRID2IPA4D2P6 1211 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 TOR1BO14657 336 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 NRDCO43847 1150 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 CPP00450 1065 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 ITIH2P19823 946 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 CA4P22748 312 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 CETN2P41208 172 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 RABIFP47224 123 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 FAM193AP78312 1265 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 AP1B1Q10567 949 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 AGERQ15109 404 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 INAVAQ3KP66 663 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 ARMC12Q5T9G4 340 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 KAZNQ674X7 775 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 PSAPL1Q6NUJ1 521 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 SPATS2Q86XZ4 545 aaKnown RBP24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 NAXDQ8IW45 347 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 NDUFAF2Q8N183 169 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 RNF10Q8N5U6 811 aaKnown RBP24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 LRRC57Q8N9N7 239 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 DEFB124Q8NES8 71 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 PDCD6IPQ8WUM4 868 aaKnown RBP24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 UBE2Q2Q8WVN8 375 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 BMFQ96LC9 184 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 WRAP53Q9BUR4 548 aaKnown RBP24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 AMFRQ9UKV5 643 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 EFR3BQ9Y2G0 817 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 LRRK1Q38SD2 2015 aa24.5■■□□□ 1.51
SDF2L1-201ENST00000248958 KCNK3O14649 394 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 SH3BP5O60239 455 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 CYP2A6P11509 494 aaPredicted RBP24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 KRT10P13645 584 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 MARCKSL1P49006 195 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 RWDD2BP57060 319 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 CLDN2P57739 230 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 TRAF2Q12933 501 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 NPNTQ6UXI9 565 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 DPPA4Q7L190 304 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 P3H4Q92791 437 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 CENPTQ96BT3 561 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 IFT43Q96FT9 208 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 TTLL3Q9Y4R7 772 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 PCDHB9Q9Y5E1 797 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 RAI2Q9Y5P3 530 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 ADGRG1Q9Y653 693 aa24.49■■□□□ 1.51
SDF2L1-201ENST00000248958 MACROD2A1Z1Q3 448 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 MIF4GDA9UHW6 222 aaKnown RBP24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 RAD51BO15315 384 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 KRT86O43790 486 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 PGLSO95336 258 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 HLA-DQB2P05538 268 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 C6P13671 934 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 KCNA4P22459 653 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 Q6ZSR6 202 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 PEX26Q7Z412 305 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 PTAR1Q7Z6K3 402 aaPredicted RBP24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 NT5DC3Q86UY8 548 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 LRRC8AQ8IWT6 810 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 OR13H1Q8NG92 308 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 SETD7Q8WTS6 366 aaKnown RBP24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 GRPEL1Q9HAV7 217 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 GPR27Q9NS67 375 aa24.48■■□□□ 1.51
SDF2L1-201ENST00000248958 POM121BA6NF01 834 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 KCNK1O00180 336 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 MTSS1O43312 755 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 LZTS3O60299 673 aaPredicted RBP24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 JCHAINP01591 159 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 PTPN7P35236 360 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 LIG3P49916 1009 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 YPEL5P62699 121 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms